Plasmodium gaboni: PGSY75_1017000
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Entry
PGSY75_1017000 CDS
T08136
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pgab
Plasmodium gaboni
Pathway
pgab03030
DNA replication
pgab03410
Base excision repair
pgab03420
Nucleotide excision repair
pgab03430
Mismatch repair
pgab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGSY75_1017000
03410 Base excision repair
PGSY75_1017000
03420 Nucleotide excision repair
PGSY75_1017000
03430 Mismatch repair
PGSY75_1017000
03440 Homologous recombination
PGSY75_1017000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgab03032
]
PGSY75_1017000
03400 DNA repair and recombination proteins [BR:
pgab03400
]
PGSY75_1017000
Enzymes [BR:
pgab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGSY75_1017000
DNA replication proteins [BR:
pgab03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
PGSY75_1017000
DNA repair and recombination proteins [BR:
pgab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
PGSY75_1017000
MMR (mismatch excision repair)
DNA polymerase delta complex
PGSY75_1017000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
E2-Crich
IDM1_C
C6_DPF
Motif
Other DBs
NCBI-GeneID:
29776537
NCBI-ProteinID:
XP_018641556
UniProt:
A0A151LL14
LinkDB
All DBs
Position
10:<594572..>597856
Genome browser
AA seq
1094 aa
AA seq
DB search
MEELKTCPFTNVIPYGLLYDKLKKEKNNEVPENYVIEEFDKLLKNYERPNVYDEIGNATF
KNDEDLITFQIDLDYTVENIFKNMIYNEGSSNNSILNDIFMPYRILLSKDKNYVSVPIIR
IYSLRKDGCSVLINVHNFFPYFYVEKPDDFDNEDLIKLEMLMNENLNLNSQYKIYEKKIL
KIEIVKTESLMYFKKNGKKDFLKITVLLPKMVPSLKKYFEGIVHVNNKEIGGIVYEANLP
FILRYIIDQKITGSSWIKCKKGHYYIRNKNKKISNCTFEIDISYEHVEPITLENEYQQIP
KLRILSFDIECIKLDGKGFPEAKNDPIIQISSILYFQGEPIDNCTKFIFTLLECASIPGS
NVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTALNLKKLKFLGRIKN
VASTVKDSSFSSKQFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKEQK
EDVHYSIMNDLQNESPESRKRIATYCIKDGVLPLRLIDKLLFIYNYVEMARVTGTPFVYL
LTRGQQIKVTSQLYRKCKELNYVIPSTYMKVNTNEKYEGATVLEPIKGYYIEPISTLDFA
SLYPSIMIAHNLCYSTLIKSNNEVSDLQSDDITTIQGKNNLKFVKKNVKKGILPLIVEEL
IEARKKVKLLIKNEKNNITKMVLNGRQLALKISANSVYGYTGASSGGQLPCLEVAVSITT
LGRSMIEKTKERVESFYSKNNGYEHNSTVIYGDTDSVMVKFGTNNIEEAMTLGKDAAERI
SKEFLAPIKLEFEKVYCPYLLLNKKRYAGLLYTNPNKHDKMDCKGIETVRRDFCILIQQM
METVLNKLLIEKNLNSAIEYTKSKIKELLTNNIDMSLLVVTKSLGKTDYETRLPHVELAK
KLKQRDSATAPNVGDRVSYIIVKGVKGQAQYERAEDPLYVLDNNLAIDYNHYLDAIKSPL
SRIFEVIMQNSDSLFSGDHTRHKTILTSSQTALSKFLKKSVRCIGCNSSIKKPPLCNHCK
ENKEFSIYMQKIKDFKSKQNEFFQLWTECQRCQGNLHVDVICMNRDCPIFYRRAKIKKDV
ANLQEQVTSLRMDW
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactgaaaacttgcccattcacgaatgtgattccgtacgggttgttatatgat
aaattaaaaaaagagaaaaataatgaagtaccagaaaattatgtaatagaagaatttgat
aagctgttaaaaaattatgagagaccaaatgtatacgatgagataggaaatgcaacattt
aagaacgatgaagatttgataacatttcaaatagatttagattatacagtagagaatata
tttaaaaatatgatatataacgaaggtagttcaaataatagtatattaaatgatatattt
atgccatataggatattattaagtaaagataaaaattatgtgtctgttcctattattcgt
atatatagtttaagaaaagatggatgtagtgtattaataaatgttcataatttttttcct
tatttttatgttgaaaaacctgatgattttgataatgaagatttaataaaattagaaatg
ttaatgaatgagaatttaaatttaaatagtcaatataaaatatatgaaaagaaaatatta
aaaattgaaattgtaaaaacagaaagtttaatgtattttaaaaaaaatggaaaaaaagat
tttttaaaaattacagttttattaccaaaaatggtaccctcattaaaaaaatattttgaa
ggtattgttcatgtaaataataaagaaattggtggaattgtatatgaagctaatttacca
tttatattaagatatataattgatcaaaaaattacaggatcatcatggataaagtgtaaa
aaaggtcattattatataagaaataaaaataaaaaaatatcaaattgtacattcgaaatt
gatattagttatgaacatgtagaaccaattactttagaaaatgaatatcaacaaatacct
aaattaagaattctttcatttgatattgaatgtataaaattagatggtaaaggatttcca
gaagcaaaaaatgatcctattattcaaatttcatctattttatattttcaaggcgaacct
attgataattgtacaaaatttatttttacacttcttgaatgtgccagtataccaggttca
aatgttatatggtttaatgatgaaaaaaccttgttagaagcatggaatgaatttattatt
agaattgatcctgattttctaactggatataatatcattaattttgatttaccttatata
ctaaatagaggtacagctttaaatttaaaaaaattgaaatttttaggtagaataaaaaat
gttgcaagcacagttaaagattctagtttttcatctaaacaatttggtacacatgaaaca
aaagaaataaatattttcggaagaatacaatttgatgtttatgatttaattaaaagagat
tataaattgaaatcatatacattaaattatgtttcttttgaatttttaaaagaacaaaaa
gaagatgtacattatagtataatgaatgatttacaaaacgaaagtccagaatctagaaaa
agaatagcaacatattgtattaaagatggtgtattaccattaagattaatagataaatta
ttatttatttataactatgttgaaatggctagagttactggaacaccatttgtatattta
ttaacacgtggacaacaaattaaagttacatcacaattatatagaaaatgtaaagaacta
aattatgttatacctagtacatatatgaaagttaatacaaatgaaaaatatgaaggagca
actgtactagaacctattaaaggttattatattgaaccaatatcgacattagattttgca
tctttatatccatctattatgattgcacataatctatgttattctactctaatcaaaagc
aacaatgaagtttcagatttacaaagtgatgatatcacaacaatacaaggaaaaaataat
ttaaaatttgttaagaaaaatgttaaaaagggaattctcccattaattgtagaagaatta
atagaagctagaaaaaaagttaaattattaatcaaaaatgaaaaaaataatataaccaaa
atggtacttaatggtaggcaattagctctcaaaatttcagcaaattctgtatatggatat
acaggagcatcatcaggtggacaattaccatgtttagaagtagctgtttctattactaca
ttaggcagatctatgattgaaaaaactaaagaaagggtagaaagtttttatagtaaaaat
aatggatatgaacataattcgacagttatctatggagatacagattctgttatggtcaaa
tttggaactaataatattgaagaagccatgacactaggaaaagatgcagcagaacgtatt
agtaaagaatttttagcacctataaaattagaattcgaaaaagtatattgtccatattta
ttattaaataaaaaaagatatgcagggttattatatactaatccaaataaacatgataaa
atggattgtaaaggaattgaaactgtaagaagagatttttgtatattaatacaacaaatg
atggaaactgttttaaataaattattaattgaaaaaaatttaaatagtgctattgaatat
accaaaagtaaaataaaagaattgctaacaaacaatattgatatgagtttattagttgta
acgaaatcattaggaaaaacagattatgaaacaaggttaccacatgtagaactagccaaa
aaattaaaacaaagagacagtgctacagcacctaatgttggagatcgagttagttatata
attgttaaaggtgttaaaggacaagcacaatatgaaagagcagaagatcctttatatgtt
ttagataataatcttgctatagattataatcattatctagatgcaattaaaagtccttta
tctaggatatttgaagttattatgcaaaattcagattccttattttcaggtgatcataca
agacataaaactatattaacatcaagtcaaactgccttatccaaatttttaaaaaaatca
gttagatgcataggttgtaacagttccataaaaaaaccacctctatgtaaccactgtaaa
gaaaataaagaattctctatctatatgcaaaaaattaaagattttaagagtaaacaaaat
gaattctttcaattatggactgaatgccaacgatgtcaaggaaatttacatgtggatgtt
atatgtatgaatagggattgccctatattttataggcgagcaaaaattaaaaaggatgta
gctaacttacaggaacaggttacttcattaagaatggattggtga
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