Plasmodium gaboni: PGSY75_1031500
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Entry
PGSY75_1031500 CDS
T08136
Name
(RefSeq) putative DEAD/DEAH box helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pgab
Plasmodium gaboni
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_1031500
03041 Spliceosome [BR:
pgab03041
]
PGSY75_1031500
03036 Chromosome and associated proteins [BR:
pgab03036
]
PGSY75_1031500
Enzymes [BR:
pgab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PGSY75_1031500
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PGSY75_1031500
mRNA cycle factors
Common to processing body (P body) and stress granule
PGSY75_1031500
Spliceosome [BR:
pgab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PGSY75_1031500
Chromosome and associated proteins [BR:
pgab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PGSY75_1031500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
29776678
NCBI-ProteinID:
XP_018641703
UniProt:
A0A151LLB7
LinkDB
All DBs
Position
10:<1152839..>1156120
Genome browser
AA seq
829 aa
AA seq
DB search
NSSNVVRKNNLKIKEYLIEDNNIKDLNCICSKNVAPPITVILQEENYISNTYDMMQNNKN
IDNNNDNNNNNMCKSEIYIYNINNKEPKEDKEENINNNIIIYSNKKDNEKNSCLNDVINK
YLNDLDNQEKIEPKEEQDSCVNNINIINNKNNIHITNNTNNSNNINNINITSHINNNYYH
FNDNSYNYHENENINMNPYLNLQGYIYNTTIEEKQNDLCEQYIPYPTNNIEENMNNYIND
IYNEHSYGLYQSCMNDNMKNENDDNNNNTCVVTSCEKIYEYKNLPQQQQSYDENNYYSHN
KKRTNYSNNNKTNRCDKYTNENKYQRGLYNKYLYTKDKNNLYNSSKMKDHKYNEKKDRRT
ENNNNNNNNKNNSNSFYGDKHITYNKNKKDNKFFDDDKKHKRYSEESECSIFNDDNYRVQ
CKLYGDEKINIPKALINMEQLSNQCDEELYKNICLKGYYNMTTIQKYSIPIILKKINLIA
CSQTGSGKTFSFLCPIISNLKKENEIFRPYFHGAYACISPLCLILCPTRELVIQIQNEVN
SLTKNMSIVCMSFYGGETMKEQIAKINEKQGDIIICTPGRLLDLLNSCKVSLSFIKYLIF
DEADEMISLGLKKQMDEIIFQKDLSPKDTRQTIFFTATFSDKLKEHIENYMSTPYIYLNI
KQKREMKNRIREIVKYVPAKSKFIELLKDIKILKGQAIIFVELRQSINNVFNFLKTKGYN
VDYLHGKMSQIRRQSVFESFKNKSVQILIATSIAARGLDFPDLELVINYDLPSEFEQYMH
RIGRTGRIGKSGMAINYFNSSNKKIIDKLIDHLRKYDQPVPNWLIHFKK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
aattcatcgaatgttgttagaaaaaataatttgaaaattaaggaatatttaatagaagat
aataatattaaagatttaaattgtatatgttctaaaaatgtggcccctcctataacagtt
atattacaggaagaaaattatatttccaacacatatgatatgatgcaaaataataaaaat
attgataataataatgataataataataataatatgtgtaaaagtgaaatttatatttac
aatataaataataaggaacctaaggaagacaaagaagaaaatataaataataatattatt
atatatagcaataaaaaagataatgaaaaaaatagctgtttaaatgatgttataaataaa
tatttaaatgatttagataatcaagaaaagatagaacctaaagaggaacaggacagctgt
gtaaacaatataaatattataaataataaaaataatatacatattacaaataatacaaat
aattcaaacaatataaataatataaatatcacaagtcatattaataataattattatcat
tttaatgataattcatataattatcatgagaatgaaaatataaatatgaatccttattta
aatctgcaaggatatatttataatacaaccatagaagaaaaacaaaatgatttatgtgaa
cagtatattccatatcctacaaataatattgaagaaaatatgaataattatatcaatgac
atatacaatgaacactcttatggtctatatcaatcatgtatgaatgataatatgaaaaat
gaaaatgatgataataataataatacttgtgtagtgacatcctgtgaaaaaatatatgaa
tataaaaacctaccacagcaacaacaatcatatgatgaaaataattattattcacacaat
aaaaaaagaactaactattcaaataataataaaacgaataggtgtgataaatatacaaat
gaaaataaatatcaaagaggtttatataataaatatttatatacaaaagataaaaataat
ttatataacagtagtaaaatgaaagatcataaatataatgagaaaaaagacagaagaact
gaaaataataataataataataataataaaaataatagtaatagtttttatggtgacaaa
catattacatataataagaacaaaaaggataataaattttttgatgatgataaaaaacat
aaaagatattctgaagaatctgaatgtagtatattcaatgatgataattatcgtgtgcaa
tgtaaattatatggtgatgaaaaaataaatattcctaaggcattaataaatatggagcaa
ttaagtaaccaatgtgatgaagaattatataagaatatatgcttgaaaggttactataat
atgactactattcaaaaatattccatcccaataattttaaaaaaaataaatcttatagca
tgttcacaaacaggaagtggaaaaacattttcttttttatgtcctattatatctaatctt
aaaaaagaaaacgagatattccgtccttacttccatggagcatatgcatgtatatctcct
ttgtgtttaatattatgtccaacccgagaattagtaatacagatacaaaacgaggttaat
agcttaacgaaaaatatgagtatagtttgcatgtccttttatggaggggagacaatgaag
gaacaaattgccaagataaatgaaaaacagggagatattatcatttgcacaccaggaagg
ttattggatttattaaatagttgtaaagtaagtctttcatttataaaatatttaattttt
gatgaagctgatgaaatgatatctctaggcttaaaaaaacaaatggacgaaataattttt
caaaaggatttaagtccaaaggatacgagacaaacaatattctttactgcaacattctct
gataagttaaaggagcatatagaaaattatatgagcaccccttatatatatttgaatata
aagcaaaagagggagatgaagaataggataagagagattgtgaaatacgtacctgcaaag
tccaaatttattgaacttttaaaggatattaaaatattaaaaggacaagccataatattt
gtagaattaagacaatcaataaataatgtttttaattttttaaaaacaaaaggttataat
gtggattatttgcatggtaaaatgagtcagattaggagacaatcagtatttgagagtttt
aaaaataaatctgttcaaatactcatagctacatcaatagcagcaagaggattagatttt
ccagatttagaattagtaataaattatgatcttccttcagaatttgaacagtatatgcat
agaattggaaggactggaaggattggtaagagtgggatggctataaattattttaatagt
tcaaataaaaaaattattgataaacttattgatcatttgaggaaatatgatcaaccggtt
cctaactggttgatccacttcaagaaatga
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