Plasmodium gaboni: PGSY75_1107000
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Entry
PGSY75_1107000 CDS
T08136
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pgab
Plasmodium gaboni
Pathway
pgab03018
RNA degradation
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_1107000
09123 Folding, sorting and degradation
03018 RNA degradation
PGSY75_1107000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_1107000
03041 Spliceosome [BR:
pgab03041
]
PGSY75_1107000
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PGSY75_1107000
mRNA degradation factors
5'-3' decay
Lsm complex
PGSY75_1107000
Spliceosome [BR:
pgab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PGSY75_1107000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
29776788
NCBI-ProteinID:
XP_018640990
UniProt:
A0A151LIE0
LinkDB
All DBs
Position
11:171269..172065
Genome browser
AA seq
126 aa
AA seq
DB search
MVFPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISEC
YVRGNSIKYIRVQDQAIEQAIEETAEQKARNMGRGRGGRGRGRGGMNRGTYGRGRGGAMR
RGGRGQ
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcccttaactttgttaaaatgttctcaaaatcaaccagtgatggttgaatta
aagaatggagaaacatacagtggttttttagttttctgtgatcgatttatgaatttgcat
atgaaaaatataatatgtacatcaaaagacggagataaattctggaaaatttcagagtgt
tatgtgagaggaaatagtataaaatatattcgtgtgcaagatcaagctatagaacaagcc
attgaagaaacagccgaacaaaaagctagaaatatgggaagaggaagaggaggacgtggt
agaggccgaggtggcatgaataggggcacgtatgggcgaggtcgcggaggtgccatgaga
agaggaggaagaggtcaatga
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