Plasmodium gaboni: PGSY75_1128600
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Entry
PGSY75_1128600 CDS
T08136
Name
(RefSeq) putative CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pgab
Plasmodium gaboni
Pathway
pgab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGSY75_1128600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_1128600
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PGSY75_1128600
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PGSY75_1128600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
29776999
NCBI-ProteinID:
XP_018641202
UniProt:
A0A151LIW4
LinkDB
All DBs
Position
11:complement(947096..948661)
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AA seq
521 aa
AA seq
DB search
MCIDSSNKKENMCIDSSNKKENICIYSSNKKENMCIDSSDKKENMCIDSSDKKDEENIKK
EHQNNDDEILENINKCNQIDIFIDNKNKINFISEENKKEDILNIKKNIYEQDTTYSDIHL
ITTEHTDEEKNILCNEHNEEKIITQKNIQISDKKINMNSKDKEYINKINNNNCDIQGNHH
HVSDEKNMLINEDVTKNNDTFSKKLNSKFSKEEKKNDNDKKAIINDDIVYDINVSISVDE
QNENLKSDKNLKSDENLKSDENLKSDEKIQSDEKLQSDVKLQSDEKLKSDEKLQSDDILK
NNKILSCEEEEEENLSLEEILYETTERSKSYNRKNYGLLGILKVIKMTDPNLNILAIGSD
LTTLGLNLNSPNYICTSVSSPFSENPIENEEDFIKPISYLNTQFQIRLSLLLKLQTETLF
YIFYNLPRDVLQAYAASELYIRKWIYHIIYKKWFTPKNSTNNMNLEKCDSWIYFDPITWS
KKTYDNYLNIKDDIMNVEDVTKCIEQIIKLQSYYNIHQQNH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatagattcttctaataaaaaagaaaatatgtgtatagattcttctaataaaaaa
gagaatatatgtatatattcttctaataaaaaagaaaatatgtgtatagattcttctgat
aaaaaagaaaatatgtgtatagattcttctgataaaaaagatgaggagaatataaaaaaa
gaacatcaaaataatgacgatgaaatattagaaaatataaataaatgtaatcaaatagat
atatttattgataataaaaataaaattaattttatatcagaagaaaataaaaaggaagat
atattaaatattaaaaaaaatatatatgaacaagatactacctatagtgatatacatctt
ataactacagaacatactgatgaagaaaaaaatattctatgtaatgaacataatgaagaa
aaaataattacacaaaaaaatatacaaatttctgataagaaaataaatatgaactctaaa
gataaggaatatattaataaaataaataataacaactgtgacatacaagggaatcatcat
catgtatctgatgaaaaaaatatgttgatcaacgaagacgtgacgaaaaataatgacaca
ttctcaaaaaaattaaatagtaaattttcaaaggaggaaaaaaaaaatgataatgacaag
aaggccattattaatgatgatattgtgtatgacataaatgtaagtataagtgttgacgag
caaaatgaaaatttaaaaagtgataaaaatttaaagagtgatgaaaatttaaaaagtgat
gaaaatttaaaaagtgatgaaaaaatacaaagtgatgaaaaattacaaagtgatgtaaaa
ttacaaagtgatgaaaaattaaaaagtgatgaaaaattacaaagtgatgatattttaaaa
aataataagattctatcttgtgaagaagaagaggaagaaaatctttccttagaagaaata
ttatatgaaacaacagaaagatcaaaaagttataaccgcaaaaattatggacttttaggt
atcttaaaagttataaaaatgacagaccctaatttaaatatattagctataggttctgat
ttaacaacattaggattaaatttaaattcacctaattatatttgtacatctgtttcttca
ccattctctgaaaaccctatagaaaatgaagaagattttatcaaacctatatcttattta
aatacacaatttcaaatacgattatcattattattaaaattacaaacagaaactttattt
tatattttttataatttaccaagagatgtattacaagcatatgcagcatcagaactttat
ataagaaaatggatatatcatattatatataaaaaatggtttacccctaaaaattctaca
aataatatgaatttagagaaatgtgattcatggatatattttgatccaataacatggtca
aaaaaaacatatgataattatttgaatataaaagatgatataatgaatgtagaggatgtt
actaaatgcattgagcaaataattaaactacaatcttattataacatacaccagcaaaat
cattag
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