Plasmodium gaboni: PGSY75_1234800
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Entry
PGSY75_1234800 CDS
T08136
Name
(RefSeq) putative splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pgab
Plasmodium gaboni
Pathway
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_1234800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgab03021
]
PGSY75_1234800
03041 Spliceosome [BR:
pgab03041
]
PGSY75_1234800
03036 Chromosome and associated proteins [BR:
pgab03036
]
PGSY75_1234800
Transcription machinery [BR:
pgab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PGSY75_1234800
Spliceosome [BR:
pgab03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PGSY75_1234800
Complex B
PGSY75_1234800
Complex C
U2 SnRNP specific factors
PGSY75_1234800
Chromosome and associated proteins [BR:
pgab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PGSY75_1234800
TFTC complex
PGSY75_1234800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
29777512
NCBI-ProteinID:
XP_018640786
UniProt:
A0A151LGY9
LinkDB
All DBs
Position
12:1263976..1268513
Genome browser
AA seq
1321 aa
AA seq
DB search
MPVLYHLTLQKPTAITKTVYGNFSGPRFHEIIVAKGQVLELLRSDKQGKLNVIISKDIFG
IIRSISTFRLTGSNKDYIVIGSDSGRLVILEYNNEKNDFVRVHCETYGKTGIRRIIPGEY
IAVDPKGRALMICAVEKQKFVYILNRDNKENLTISSPLEAHKSHSICHDVVGLNVGFENP
MFVSIEQNYESLDKQINEELENENDDEDKSDEERKNSNNDINDKHIIKDEKNNNFHLDYA
KKVLCFWELDLGLNHVIKKHILPIDITAHLLIPLPGGQQGPSGVLICCENFIVYKKVDHE
DIYCAYPRRLEIGQDKNISIICWTMHRIKKFFFILIQSEYGDLYKIEVDHEDGIVKEIVC
KYFDTVPIANSISVLKSGSLFVAAEFGNHYFYQFSGIGDDNKQFMCTSNHPLGKNAIIAF
KTNKLKNLYLVDQIYSLSPILDMKIIDAKNTHTPQIYTLCGRGPRSSLRILQHGLSIEEL
ADNELPGKPKYIWTIKKDNLSEYDGYIVVSFEGSTLILEIGESVEEVSDTLLLNNVTTLH
INILYDNSFIQVYDTGIRHINGKIVQEWVAPKNKQIKAASSNSSQIVISLSGGELIYFEI
DESHTLVEIFRKNLNVEVLCLSIQQIPPNRVRANFLAVGCLDNVVRLLSIEKDKYFKQLS
THLLPNNSSPQDICISEMNDNGNTNKERNIIFLNIGLNTGVLLRSIIDPIAGTLSNHYSK
YLGAKSIKICPVNVNKNPALLVLCEKTYLCYMHQGKFLYSPLNYDMLEYASSFYSPQCSD
GYVAISSNSLRIFRFYRLGEVFSQNILHLTFTPRKIVPLPFPSLFYDHDSSLELERKKKI
RMLAIIEADHNSYDENTQREIQKALKDIKLSDTEKRKENNYENNNMYPNGDVDNIDVNES
SNINEEFNSNDNISLEHNHKKDVSDNNKNDTENAIETYENNTSLNESNDEENEDEYYYDR
IGTFKAGQGKWGSCIKIINPVNLQILDKISLDMEEAALSVCACELEALHCLIVGTTTNLS
LKTKTLTSASLRVYTYDIQYKLNLLHITPVEEQPYCFCSYNGKLIASIGNKLRIYALGKK
KLLKKCEYKDIPEAIVSIKISGNRIFACDIRESVLIFFYDPNQNTLRLISDDIIPRWITC
SEILDHHTIMAADKFDSVFILRVPEEAKQDEYGITNKCWYGGEIMNSSTKNRKLEHMMSF
HIGEIVTSMQKVRLSPTSSECIIYSTIMGTIGAFIPYDNKEELELTQHLEIILRTEKPPL
CGREHIFFRSYYHPVQNVVDGDLCEQFSSLPYDAQTKIANDLERTPEDILRKLEDIRNKI
L
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgttgtatcatctgacattacagaagcctacggctattaccaagacagtttat
ggtaatttttctggtcctcgatttcatgaaataattgtagctaaaggacaagtactagag
ttactaagatcagataaacaagggaaattaaatgtgataatatctaaagatatttttggt
attataagaagtatatctacctttcgattaacaggaagtaataaagattatatagttatt
ggtagtgactcaggtagattagtaatattagaatataataatgaaaaaaatgattttgtt
agagtacattgtgaaacatatggaaagacaggtatcagaagaataatcccaggagaatat
attgctgttgatcctaaaggtagagcattaatgatatgtgctgttgaaaaacagaaattt
gtatatattttaaatagagataataaagaaaatttaaccataagtagtcctttagaagct
cataaatcacattcaatttgtcatgatgttgtaggtttaaatgtaggctttgaaaaccct
atgtttgtatctattgaacagaattatgaatctttagataaacaaataaatgaagaatta
gaaaatgaaaatgatgatgaagataaaagtgatgaagaaaggaaaaatagtaataatgat
ataaatgataaacatataataaaggatgagaaaaataataattttcatttagattatgca
aaaaaagttttatgcttttgggaattagatttaggtttaaatcatgtaataaaaaaacat
attttacctatagatattactgctcatttattaatacctttacctggtggtcaacaagga
ccaagtggtgttttaatttgttgtgaaaattttatagtttataaaaaagtagatcatgaa
gatatatattgtgcttatccaagaagattagaaataggacaagataaaaatatttctata
atttgttggactatgcatagaataaagaaatttttttttatacttattcaatccgaatat
ggagatttatataaaatagaagtagaccatgaagatggaattgtaaaagaaattgtatgt
aaatattttgatacagtacctatagcaaattcaatatctgttttaaaatcgggatcatta
tttgttgctgctgaatttggtaatcattatttttatcagttctctggaattggtgatgat
aataaacagttcatgtgtacatctaatcatccattaggaaaaaatgctataatagcattt
aaaacgaataaattaaaaaatctttatcttgttgatcaaatatattctctttcacctata
ttagatatgaaaataattgatgctaaaaatacacatactccacaaatatataccttatgt
ggaagaggtcctagatcttctttacgtatcttacagcatgggttaagtattgaagagcta
gctgataatgaattacctggtaaaccgaaatatatatggacaataaaaaaagataattta
agtgaatatgatggatatattgtagtcagttttgaaggtagtactttaattctagaaata
ggtgaaagtgttgaagaagtatcagatacattattattaaataatgtaactactttacat
attaatatattatatgataattcgtttattcaagtatatgatacaggtattagacatata
aatggtaaaattgtacaagaatgggtagcaccaaaaaataaacaaatcaaagctgcatca
tctaatagttcacaaattgttatatctttaagtggtggagaacttatttattttgaaatt
gatgaatcacatactttagtagaaatatttagaaaaaatttaaatgtagaagtattatgt
ttatctatacaacaaataccaccaaatcgtgtaagagctaactttttagctgtaggttgt
ttagataatgttgttagattattatctatagaaaaagataaatatttcaaacaattatct
acacatttattaccgaataattcatctccacaagatatttgtatttctgaaatgaatgat
aatggaaatactaataaagaacgtaatattatttttttaaatattggtttgaatacaggt
gtattattaaggagtattattgatcctattgctggtacattaagtaatcattattccaaa
tatttaggagccaaaagtataaaaatatgtcctgtaaatgtaaacaaaaatccagctctt
cttgtactttgtgaaaaaacatatttatgttatatgcatcaaggaaaattcctatattct
ccattaaattatgatatgttagaatatgcttcttctttctattcaccacaatgttcagat
ggttatgtagctatatcatctaatagtttgagaatatttcgattttatagattaggtgaa
gtttttagtcaaaacatattgcatttgacttttaccccacgaaaaatcgtaccattgcca
ttcccttctttattttatgatcatgactcatcactagaattagaaagaaagaaaaaaata
cgtatgttagccatcattgaggcagatcataattcgtatgatgaaaatacgcaaagagaa
atacaaaaggctttaaaggatataaaattgagtgatacagaaaagagaaaagaaaacaat
tatgaaaataataatatgtatccaaatggtgatgtggataatatagatgtaaacgagtct
tcaaatattaatgaagaatttaattcaaatgataacatttctttagaacacaatcataaa
aaagatgtatcagacaataataaaaatgatacagaaaatgcaatagagacatatgaaaat
aatacttcattaaatgaatcgaatgatgaagaaaatgaagatgagtattattatgataga
ataggtacttttaaagctggacaaggaaaatggggttcatgtataaaaattataaatcca
gtaaatttacaaatattagataaaatatctttagatatggaagaagctgcattaagtgta
tgtgcatgtgaattagaagctttacattgtcttattgttggtacaacaacaaatttatca
ttaaaaacaaaaactcttacatcagcttcattaagagtatatacgtatgatatacaatat
aaattgaatttattacatataacacctgtagaagagcaaccatattgtttttgctcatac
aatggaaaattaattgcttccattggcaataaattaagaatatatgcattaggaaaaaaa
aaattacttaaaaaatgtgaatataaagatataccagaagcaattgtatctatcaaaatt
tctggaaatcgtatctttgcatgtgacatcagagaatctgtgttaatatttttttatgat
ccaaatcaaaataccttgagattaatttcggatgacattattccaagatggataacctgt
tctgaaattcttgatcatcatacgattatggcagcggataaattcgattcggtctttatt
ttgagggttccggaggaggctaaacaagacgaatatggtataacaaataaatgttggtat
ggtggagaaataatgaacagttcaactaaaaacagaaagctggaacatatgatgagtttt
catattggagaaatagtaacgtccatgcaaaaagtcagattatctcctaccagcagtgaa
tgtataatttattcgacgatcatgggtacaataggtgcttttattccatatgataataaa
gaagagcttgaattgacacaacatttagaaataattttacgaacagaaaagcccccttta
tgtggcagagagcacatattttttcgttcgtactatcatcctgttcagaatgttgtcgat
ggagatttgtgtgaacaattttcaagcttgccttatgatgcgcaaacaaaaattgcaaat
gatttggaaagaactccagaagatattttaagaaaactggaagatataagaaataaaata
ctttaa
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integrated database retrieval system
