Plasmodium gaboni: PGSY75_1243800
Help
Entry
PGSY75_1243800 CDS
T08136
Name
(RefSeq) putative microtubule associated katanin
KO
K14962
COMPASS component SWD2
Organism
pgab
Plasmodium gaboni
Pathway
pgab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PGSY75_1243800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_1243800
03036 Chromosome and associated proteins [BR:
pgab03036
]
PGSY75_1243800
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PGSY75_1243800
Chromosome and associated proteins [BR:
pgab03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
PGSY75_1243800
COMPASS/SET1 complex (yeast)
PGSY75_1243800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
29777586
NCBI-ProteinID:
XP_018640859
UniProt:
A0A151LGX1
LinkDB
All DBs
Position
12:complement(1543705..1545204)
Genome browser
AA seq
370 aa
AA seq
DB search
MNSILYKKIKLTDDAVKNLSVIRAFKYKQSITKNISWSCDGELLLASNGNDSITLYSLIK
GNNIKTLYSKKSGVDVVRFLNNTNEVIICSTKSNNSEHKQFLRFWDIKENKYIKSLPQIG
NICELNGISINYNKKLMLVNSDDGHVKLYYFNCDSPLILYKSNFVRPVSCFDNEGHVFIA
SYGKKEIHFYDLLMYDRGEYNIIDLKNIMKNEEFITNLFFTPNNKYIIISTNLNHHYKID
SITGTYICTYKYPLQANQQCVMSNTTKDIINQHTYSQTNQKLQHTLNNTNQKNVHLENKN
DIFFMPTITPDGHYVMCGGKDAGIHIWAEAGNHVTTLYGHEGPPNNVSFNPKCSVLASSC
LNIALWQPSL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgatactttataaaaaaataaaacttactgatgatgctgtaaaaaatttgagt
gtaataagagcatttaagtataagcaatccataacaaaaaatatatcatggagttgtgat
ggggaattattattagcttctaatggtaacgattcaattacattatatagtttaataaaa
ggtaataatataaaaactttatatagtaaaaaatctggtgtggatgttgttcgttttcta
aacaatactaacgaagtaattatatgttccaccaaatctaataattcagaacataaacaa
tttttacgtttttgggatataaaagaaaataaatatataaaatcattaccacaaattgga
aatatatgtgaattaaatggtatttctattaattataataaaaaattaatgcttgttaat
tcagatgatggacatgtaaagttatattattttaattgtgattcccctttaattctttat
aaatcaaattttgtaagacctgtttcttgttttgataatgaaggtcatgtatttattgca
tcctatggtaaaaaagaaatccatttttatgatttattaatgtatgatcgtggtgaatat
aatattatagatttaaaaaatattatgaaaaatgaagaatttataaccaacttatttttt
actccaaataataaatatattatcatttctactaatcttaatcatcattataaaatagat
tctattaccggtacttatatatgtacgtataaatatccactccaagcaaatcaacaatgt
gttatgtcaaatacaacaaaggatattattaaccaacatacctattcacaaacaaatcaa
aaacttcaacacacattaaataatacaaatcaaaaaaatgttcatctcgaaaataaaaat
gatatctttttcatgccaaccattacgccggatggtcactatgtcatgtgtggggggaaa
gatgcgggcattcatatttgggccgaagcaggaaaccatgtaacaactttatatggacat
gaaggccctccgaacaatgttagttttaatccgaagtgctctgttctcgcttctagctgc
ttaaatatagcattgtggcaaccttcattatga
DBGET
integrated database retrieval system
