Plasmodium gaboni: PGSY75_1307600
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Entry
PGSY75_1307600 CDS
T08136
Name
(RefSeq) putative DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pgab
Plasmodium gaboni
Pathway
pgab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PGSY75_1307600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgab03021
]
PGSY75_1307600
03400 DNA repair and recombination proteins [BR:
pgab03400
]
PGSY75_1307600
Enzymes [BR:
pgab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PGSY75_1307600
Transcription machinery [BR:
pgab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PGSY75_1307600
DNA repair and recombination proteins [BR:
pgab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PGSY75_1307600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
29777733
NCBI-ProteinID:
XP_018639883
UniProt:
A0A151LD51
LinkDB
All DBs
Position
13:complement(245507..247453)
Genome browser
AA seq
619 aa
AA seq
DB search
MSLLFLLLFFLATFNIYWSFCVILKTKNPAFVPVQINNRERHKPNNLKRFYINQNDGVKN
RNYNNRDIYKFEGIDEENKDGKEIIDEDYLKEYEEAYHKYDNMDDDEKKRRVSDNKMNWF
EIRKGEKEKGHRYNVYDNEIMKKDLKEIDLERADKIDRSKGELPPYIYESGKLYEGMSMD
YKPEVYDFHKYNKYFDDLCKEKKSLIDSYQLDKKLLDETYYDAKRGGPKTFGFRFKQIQP
VKYHEGRAYTYFFMHSHDVELSPIFLNAFRRVAIKHLKGGRVTALRIPNMKHEFYCIVGV
RENFFDLAQNLRQITFKNVPEDTDMDNYMIGKFRIKGPMIVVAGHMQLPKNIEIVNRNQY
ICSVAAGSYLSMDVKIESIEEYVMPEFGSQSRNRDICKDNFIHFSSSCTPVEHFVFTGQR
RGINLDTLGEINIVEMHTDGSITPKSALLKTIDYISENFQYIENALYNNCHICDDGSLDE
EFRNPEFYMDKDRYTDVPWNKYKTTSEELEETKNWLYRKDVHRQYNIDPESEQSKEERNA
MWEKSKKMREEIQKRKDQIKKGPSASEGEMVPDEERHDCLLDWPVDKSERNMNPPRWVIE
RPLEKNPHVGHEEIYDEGI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcattattattcttattactattctttttagcaacgttcaatatttattggtctttt
tgtgtaattttaaaaactaaaaaccctgccttcgtgcccgtacaaattaataaccgtgag
agacataaacccaataatctcaaaagattttatataaaccaaaatgacggtgtgaagaat
agaaattataacaacagagatatttataaatttgagggaattgatgaagaaaataaagat
ggaaaagaaattattgatgaagattatttgaaagaatatgaagaagcatatcataaatat
gataatatggatgatgatgaaaaaaaaagaagagtttcagataataaaatgaattggttt
gagataagaaaaggagaaaaggaaaaaggacatcgatataatgtttatgataatgaaata
atgaaaaaggatttaaaagaaatagatttagaaagagcagataaaatagatagatcaaaa
ggtgaattacctccatatatatatgagagtggaaagttatatgaaggtatgtctatggat
tataaacctgaggtatatgattttcataaatataataaatattttgatgatttatgtaaa
gaaaagaaatcattaattgattcttatcaattagataaaaaattattagatgaaacatat
tatgatgcaaaaagaggagggcctaaaacttttggttttcgatttaaacaaatacaacca
gtaaaatatcatgaaggtagagcatatacatatttttttatgcattctcatgatgtagaa
ttatcacccatttttttaaatgcatttagaagagttgctataaaacatttaaagggagga
agagtaactgctttacgaatacctaatatgaaacatgaattttattgtatagttggggta
agagaaaatttttttgatttagctcagaatttaagacaaataacttttaaaaatgtacct
gaggatacagatatggataattatatgataggtaaatttcgaattaaaggtccaatgata
gtagtagcaggtcatatgcaattacctaagaatatagaaattgtaaatagaaatcaatat
atatgttcagttgctgctggtagttatttatctatggatgtaaaaatagaaagtattgaa
gaatatgttatgccagaatttggatcacaatccagaaatagagatatatgtaaagataat
tttattcatttttctagtagttgtacacctgttgaacactttgtatttactggtcaaaga
agaggtattaatttagatacactgggagaaattaatattgtagaaatgcatacagatggt
tcaattacacccaaatcagcacttttaaaaaccattgattatatatctgaaaattttcaa
tatattgaaaatgcgctttataataattgccatatatgtgatgatggctctttggatgaa
gaatttcgtaaccccgaattttatatggataaagatagatatactgatgtaccatggaat
aaatataaaacaacatcagaagaattagaagaaaccaaaaattggctatatagaaaagat
gtgcacagacaatataatatcgacccagaaagtgaacaatcaaaagaagaaagaaatgct
atgtgggaaaaaagtaaaaaaatgagagaagaaattcaaaaaagaaaagaccaaattaaa
aaaggaccatctgcatccgaaggagaaatggtacctgatgaagaaaggcacgactgcttg
cttgattggcctgttgataagtctgaaagaaatatgaatccccctagatgggtaattgaa
agacctttggaaaaaaatccacatgtaggtcatgaagaaatatacgatgaaggaatatga
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