Plasmodium gaboni: PGSY75_1316500
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Entry
PGSY75_1316500 CDS
T08136
Name
(RefSeq) putative pre-mRNA-processing factor 40
KO
K12821
pre-mRNA-processing factor 40
Organism
pgab
Plasmodium gaboni
Pathway
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_1316500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgab03041
]
PGSY75_1316500
Spliceosome [BR:
pgab03041
]
Complex A
U1 snRNP components
U1 related factors
PGSY75_1316500
Complex B
PGSY75_1316500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Drf_FH1
Motif
Other DBs
NCBI-GeneID:
29777821
NCBI-ProteinID:
XP_018639971
UniProt:
A0A151LDM0
LinkDB
All DBs
Position
13:577347..580091
Genome browser
AA seq
914 aa
AA seq
DB search
MIPNMPNIPISSDIENVPNEQNIINETNITNGEYVTSGPNITGGPNIPGGPNIPGGPNIP
GGPNIPGGPNIPGGPNMPGGPNMPGGPNIPAGPSPPSIPQIPNLPTIPGMPNILNLSNLP
NLSNFPNFPGLPNIPNLPGLVPHNINNSHFMGANPMNPIGMPFMPGLLPNMNTSDYYHKN
LMHMHPGYDNYNNIMYGQPNNLGMPIPPNNMENINDMVTNNPNMMKIYNKDGIPNNSQKM
MNTHLMNLHNSMNTNYMNNFNIEKHGWVEMVAKNGRKFYYNSITKCSKWEKPNELKTKEE
IRISEKTKWKEYSCSDGRKYWYHEEKNISVWDEPEEIKKIKLECALEDKELENKDDNKKE
NIKDEEDHEAETNDKSNDSNNICDDIYNSNGEYKMNERNKNIPFNNNSTNYINVNNIEQI
NKKVDNNNNNNNNKSSMTWEKFDNKNDAREHLKFLFEEKKVNPKMTWDSALKILETDNRW
SSLVILTKGEKKQLFCEYISHVIKRNNENERRKRQKSREIIFQTLLNWDKLNESTTYVQF
ASQFYKEEWWDWITEKERDEVFQDFMDDYKSKFKETRRKKRKQKMEILKQKFQEYASDNI
NPLKWNDVQKYFRDDEDFHSLHKIDALAAWEDFYEKYHNVEKMQLKKKIYRILRKKREAF
IELLNEYHENNILNMKTQWIFFVSKIYKDTRYTDILGHQGSSPRVLFDEFIDSLQEQYLI
HKTYIKKAYKEMDLTIDENITLEDFLKTFSNVQNKYNIPDANMNFIYLSLQKKLKQKKNK
EIKHINKVAKYFSKFTDLKPTMSYNKVISIMKNTSKWSVVCTLCPKEEQKLAAYNMWKTF
INSQDLENSSDSSYSNKMYNKNSRKKDISNSKEHEYYDEEDKTTSRNNKYLRDDDSDSSA
QTIESLRTIENASS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaatatgcctaatatacccatttcatcagatatagaaaatgtacccaatgaa
caaaatataataaatgaaacaaatataactaatggtgaatatgtaacaagtggtccaaat
ataactggtgggccaaatatacctggtgggccaaatatacctggtgggccaaatatacct
ggtgggccaaatatacctggtgggccaaatatacctggtggaccaaatatgcctggtgga
ccaaatatgccgggggggccaaatatacctgcaggaccgtctccaccaagcatccctcaa
atacccaatttaccaactattccgggtatgccaaatatactgaatttatccaacttacct
aatttgtcaaattttcccaatttccctggtttaccaaatataccaaaccttccaggttta
gtaccacacaatataaataatagccacttcatgggcgctaatccaatgaacccaataggc
atgccttttatgcctggtttattacccaatatgaatacatctgactactatcataaaaat
ttaatgcacatgcatcctggttacgataattacaataatataatgtatggacaaccaaat
aatttaggcatgcccataccaccaaataatatggaaaatataaatgacatggtcacgaat
aatcctaacatgatgaaaatatacaataaagatgggataccaaataattctcaaaaaatg
atgaatacacatttaatgaatttacataacagtatgaatactaactatatgaataatttt
aatatagaaaaacatggatgggttgaaatggtagcaaaaaatggaaggaagttttattat
aattccataactaaatgttccaaatgggaaaaaccaaatgaattaaaaacaaaagaagaa
ataagaatttctgaaaaaacaaaatggaaagaatattcttgtagtgatggaagaaaatat
tggtatcatgaagaaaaaaatattagtgtatgggatgaaccagaagaaattaaaaaaata
aaattagagtgtgctttagaagataaagaattagaaaataaagatgataataaaaaagaa
aatataaaagatgaagaagatcatgaagctgaaacgaatgataaatcaaatgatagtaat
aatatatgtgatgatatatataatagtaatggagaatataaaatgaatgaacgaaataag
aatattccatttaataataatagtacaaattatataaatgttaataatatagaacaaata
aataaaaaagtagacaataataataataataataataataaatcaagtatgacatgggaa
aaatttgataataaaaatgatgcaagagaacatttgaaatttttattcgaagaaaaaaaa
gtgaatccaaaaatgacatgggatagtgctctaaaaattttagaaactgataatcgatgg
tcaagtttagtgatacttactaaaggtgaaaagaagcaacttttctgtgaatatattagt
catgttattaaaagaaataatgaaaatgaaagacgtaaaagacaaaaatcaagagaaatc
atttttcaaactttattaaattgggacaaattaaatgaatcgacaacatatgttcaattt
gcttcccaattttataaagaagaatggtgggattggattactgaaaaagaaagagatgaa
gtatttcaagattttatggatgattataaatctaaatttaaggaaacaagaagaaaaaaa
agaaaacaaaagatggaaattttaaaacaaaaatttcaagaatatgcatcagataatata
aatccattaaaatggaatgatgttcaaaaatattttagagatgatgaagattttcattca
ttacataaaattgatgctttggctgcttgggaagatttttatgaaaaatatcataatgtc
gaaaaaatgcaacttaaaaaaaaaatttatcgtattttaagaaaaaaaagagaagctttt
attgaattattaaatgaatatcatgaaaataatattttaaatatgaaaacgcagtggata
ttttttgtttctaaaatatataaggatacacgatacacagatatattaggacatcaagga
tcctcaccaagagtattatttgatgaatttattgattctttacaagaacaatatttaata
cataaaacgtatattaaaaaagcatataaagaaatggatttaactatagatgaaaatatc
actcttgaagattttttaaaaacattttctaatgtacaaaacaaatataatattcctgat
gctaatatgaattttatatatttatctttgcaaaaaaaattaaaacaaaaaaaaaataaa
gaaatcaaacatattaacaaggtagccaaatatttttctaaatttacagatcttaaacca
accatgtcatataacaaagtaattagtattatgaaaaacacaagtaaatggtccgtagtt
tgtaccttatgtcccaaagaagaacaaaagttagctgcttataatatgtggaaaacattt
ataaattctcaagatttagagaattcctctgattcatcatattctaataaaatgtataat
aaaaattcaagaaaaaaggatatctcaaattcaaaagaacacgaatattatgatgaagaa
gataaaacaacttctagaaacaataagtatttaagagatgacgattctgattcaagtgcc
caaactattgaatcgttgcgtactattgaaaatgcttcaagctag
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