Plasmodium gaboni: PGSY75_1329300
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Entry
PGSY75_1329300 CDS
T08136
Name
(RefSeq) putative chromatin assembly factor 1 subunit
KO
K10752
histone-binding protein RBBP4
Organism
pgab
Plasmodium gaboni
Pathway
pgab03082
ATP-dependent chromatin remodeling
pgab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PGSY75_1329300
03083 Polycomb repressive complex
PGSY75_1329300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgab03036
]
PGSY75_1329300
Chromosome and associated proteins [BR:
pgab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PGSY75_1329300
Histone modification proteins
HAT complexes
HATB complex
PGSY75_1329300
HDAC complexes
Sin3A-HDAC complex
PGSY75_1329300
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PGSY75_1329300
PRC2.2
PGSY75_1329300
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PGSY75_1329300
Heterochromatin formation proteins
Other heterochromatin formation proteins
PGSY75_1329300
Chromatin remodeling factors
NuRD complex
PGSY75_1329300
NuRF complex
PGSY75_1329300
NuRF complex (fruit fly)
PGSY75_1329300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
Rrn6_beta-prop
Beta-prop_WDR75_1st
LED_rpt
Beta-prop_SCAP
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
29777941
NCBI-ProteinID:
XP_018640093
UniProt:
A0A151LDR2
LinkDB
All DBs
Position
13:complement(1088787..1090526)
Genome browser
AA seq
579 aa
AA seq
DB search
MIDILHEKNKIYDFKESYESKTPIENEVPENNSVDIQNERHIIWRKNTPFLYSSLLKHKL
EWPSLTVEFLGGDNSFKSKLNYFTNKVLLGTHTSNQDLEYVYIGEIKCPIYSIKEDVLQY
ENYSGFISNKKKKKGHPLPCFEVKAKLLHPGEVMRATNLPSNSFFIVTQTSNGSALLFDY
TKHPSFPSDMSTCYPQMILKGHTNEGSGLCWNVNRVYDSYKNANIYDGYMDKDIDTGKED
DSIKDIYSVKDIYSIKDTYSVEDINSLKDVHSIKDAYSVKELEAQNELDMVNDLDTEESN
DSNNNNNNNSSFGTEVNTCNLLLASCSVDGSICLWDINKGTKSNDVPRTYGLNKSGKTAD
YNIKIYENTPTLSPLCTWHNKHTKTSFNDIFFHPKFSNALGVCDDNGYMSIYDIRKKNFF
TKAEISFNDHNEAMNTFSFDNFSEYIFSCGYSDGLISVWDMRYNKESLLKLNYHTQGINR
IKFGMISSGIFASCSDDGTACIWDLSRNNNTQILPLQKTEDDIYNNPNPVPKQLLFVHGG
HIGSIYDLAWANSNTFTIATVGVDNSIHVWHLNEQFLFQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatagatattcttcacgagaaaaataagatatacgatttcaaagaatcgtatgaatca
aaaacacctatagaaaatgaagttcccgaaaataattctgtagatatacagaatgaaaga
catattatatggagaaagaataccccttttttatatagctcgttgttaaagcataaatta
gaatggccttcattaacagtagaatttttaggaggtgataattcttttaaatctaaatta
aattattttactaataaagtattattaggaacacatacttcgaatcaagatttagaatat
gtatatataggtgaaattaaatgtcctatatattctattaaagaagatgtattacaatat
gaaaattatagtggttttataagtaataaaaaaaaaaaaaaagggcaccctttaccatgt
tttgaagttaaagcaaaattattacatcctggagaagtaatgagagcaacgaatttacct
agtaattctttttttattgtaactcaaacatctaatggaagtgctctattatttgattac
acaaaacacccatccttcccttcagatatgtctacttgttatcctcaaatgatattaaaa
ggacatacaaatgaagggagtggattatgttggaatgttaatcgtgtatatgattcttat
aaaaatgcaaacatatatgatggttacatggataaagatatagatacaggcaaggaagat
gattcaattaaagatatatattcagttaaagatatttattcaattaaagatacatattct
gttgaagatataaattctttgaaagacgtgcattctattaaggacgcatattctgttaaa
gaacttgaagcacagaatgaattggatatggttaatgatctagatactgaagaaagtaat
gatagtaataataataataataataatagttcgtttggaacagaagtcaatacttgcaat
ttattattagctagttgttcagtggatggtagtatatgtttatgggatattaataaaggt
actaaaagtaatgatgttccacgaacatatggtttaaataaaagtggaaaaacagcagat
tataatataaaaatatatgaaaatactcctacattaagtccattatgtacatggcataat
aaacatacaaaaacatcttttaatgatatattttttcatcctaaatttagtaatgcttta
ggagtatgtgatgataatggttatatgagtatatatgatataagaaaaaaaaatttcttt
acaaaggcagaaattagttttaatgatcataatgaggcaatgaatacattttcatttgat
aacttttcagaatatatattttcatgtggatatagtgatggtttaatatctgtatgggat
atgagatataataaagaatcattattaaaattaaattatcatacacaaggtattaacaga
atcaaatttggtatgatcagttcaggtatttttgcatcttgttcagatgatggaacagca
tgtatatgggacctttcaagaaataacaatacacaaatattacctcttcaaaaaacagaa
gatgatatatataataatccaaatcctgtacctaaacaattactatttgttcatggaggg
catataggaagtatatatgatctcgcctgggcaaacagcaatactttcacaatagctaca
gtaggagttgataactctatacatgtatggcacctgaacgagcaatttctttttcaataa
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