Plasmodium gaboni: PGSY75_1343900
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Entry
PGSY75_1343900 CDS
T08136
Name
(RefSeq) putative U4/U6 small nuclear ribonucleoprotein PRP4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pgab
Plasmodium gaboni
Pathway
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_1343900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgab03041
]
PGSY75_1343900
Spliceosome [BR:
pgab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PGSY75_1343900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
PRP4
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_VPS8
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
RMC1_N
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
29778060
NCBI-ProteinID:
XP_018640214
UniProt:
A0A151LE46
LinkDB
All DBs
Position
13:1500620..1502470
Genome browser
AA seq
616 aa
AA seq
DB search
MKIGDVLHDYKLYDNTKKKNNDMILNENNSKEILLEEFEIKSKLRKVCLGIPTKDIDVKN
IFRLLKEPICLFGEDSYDKRNRLKNILITKYDRLIIKKKIEKEDDVEEFKNILKRYYIDF
SNLYPSSLSESNKINEIHDKQKLKDIHVIEDEKKVHIKTVKAEDIDILKQKFYTEGTEDL
KKCRKEITIKTLPRIFLYKEMINKFQNQYSKKEYENYITSFNEHIKNESDLYVSQLGDDR
PLTMGKFSPDNSVFAISSFNSYIKIFNYRNDDYNLIKTLKNGHEEKINCIEWNYPNNYSY
YSTMNYKDLSKHNLLLASCSSDKSFCIWKPFYDEYDDINGNINDNINDNINDNMNDNMND
NINDNINDNMNNNSHKVDKNNSKKNKLSSQNKNYLLCKVNAHDDRINKICFHPLNKYVLT
CSDDETIKMFDLETKQELFYQEGHNTTVHSIAFNTYGNLYLSGDSKGGLMLWDIRTGKNI
QQMKMAHNNSIMNINFNPFLANMFCTCSTDNTIKIFDLRKFQISCNILAHNKIVTDAVFE
PTYGRYIVSSSFDTFIKIWDSVNFYCTKILCNNNNKVRNVDIAPDGSFISSTSFDRTWKL
YKNKEYAEDNILSHFM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcggtgatgttcttcatgattataaattgtatgataatacaaaaaagaaaaat
aatgatatgattcttaatgaaaataatagtaaagaaatattattggaagaattcgaaata
aaaagtaagctaaggaaagtgtgtttaggtatacctactaaagatattgatgtaaagaat
attttcagattattaaaggaacctatatgtttgtttggagaagatagttatgataaaagg
aatagattaaaaaatatattaataacaaaatatgatagactaataattaagaaaaaaata
gaaaaggaagatgatgttgaagaattcaaaaatattttaaaaagatattatatagatttt
agtaacctatatccatcaagtttatctgaatctaataaaataaatgaaattcatgataaa
caaaaattaaaagatatacatgttatagaagacgaaaaaaaggtacatattaaaacggtg
aaggcagaagatatagatattttaaaacagaaattttatacagaaggtactgaagattta
aaaaaatgtagaaaagaaataacaataaaaactttaccaagaatatttttatataaagaa
atgataaataaatttcaaaatcaatattcaaaaaaagagtatgaaaactatattacttca
tttaatgaacatataaaaaatgaatcagatttatatgtatcacagttaggtgatgacaga
cctctaaccatgggtaaattttcaccagataatagtgtatttgctattagtagttttaat
tcatatattaaaatatttaattatagaaatgatgattataatttaataaaaacattaaaa
aatggtcatgaagaaaaaattaattgtatagaatggaattatcctaataattactcttat
tatagtacaatgaattataaagatttatcaaaacataatttattattagcttcatgttca
tctgataaatcgttttgtatatggaaaccattttatgatgaatatgatgatataaatggt
aatataaatgataatataaacgacaatataaatgacaatatgaatgacaatatgaatgac
aatataaatgacaatataaatgacaatatgaataataattctcataaggttgataagaat
aattccaagaaaaataaattatcctcacaaaataaaaattatttattatgcaaagtaaat
gctcatgatgatcgaataaataaaatatgttttcatcccttaaataaatatgtattaaca
tgttcagatgatgaaactataaaaatgttcgatttagaaacaaaacaagaattgttttat
caagaaggtcataatactacagtgcatagtattgcttttaatacatatggtaatttatat
ttatcaggagattctaaaggaggtttaatgttatgggatattagaactggtaaaaatatt
caacaaatgaaaatggcacataataattctataatgaatataaattttaatccatttcta
gcaaatatgttttgtacttgttccactgataatactattaaaatatttgatttaagaaaa
tttcaaatttcttgtaatattctagcacataataaaattgttacggatgctgtttttgaa
ccaacctatggaagatatattgtttcaagttcatttgatacttttattaaaatatgggat
tctgttaatttttattgtacaaaaatattatgtaataataataataaagtacgtaatgtt
gatatagctcctgacggttcctttatttcttctacatcatttgatagaacgtggaagtta
tataaaaataaggaatacgcagaggataatattctttcccattttatgtga
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