Plasmodium gaboni: PGSY75_1364500
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Entry
PGSY75_1364500 CDS
T08136
Name
(RefSeq) putative exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
pgab
Plasmodium gaboni
Pathway
pgab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGSY75_1364500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_1364500
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PGSY75_1364500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
29778253
NCBI-ProteinID:
XP_018640407
UniProt:
A0A151LEL1
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All DBs
Position
13:2272670..2274199
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AA seq
509 aa
AA seq
DB search
MIICNNNVNHFWKNIKKNIRLDGRTFEDSRNVCINFLKDYGHVEITIGYTKVICKITSEI
VKPHDRKLKEGMLKINLDIDNSIDENENNDNMSDECLEIKNIIDRVLKTSNIINFESLCI
IPGKKVWCIYINIMVIENDGNLTDACYLSAYCGLVHFKNHQVKVIKNGNIIIDKEDINYS
PLSILNSPIVTTFAFYEEEDVCLIDPCLYEEEFMSSKISIALNKNGNLISLLKPGGIPLA
CSHIMESIEIAKKRILTILKILEDTLEEDKNIRNYLNKRNLHVKYSSLPVTIKYDNSFKL
KPDISLERYTKNSQIFEDTIKKIEEYIKYNQVQECLNNMNVKLQENNEDAIDIYTLNREG
NLNEYHNFNEQDNKRYTNENININKHNINNQNSIDPMKNTNLLNPKDIAIIKRQEFLDNH
YDANNNNNNNNNKYNKQANKTFKKELIDFSNSFTKGHNKSNNFSDNQNDICEQHDNSQES
SDDVSTIRSDESSDIDFSVAINQNLKKKK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgataatttgtaacaataatgttaatcacttttggaaaaatataaaaaagaatataaga
ttagatgggcgtacttttgaagattctagaaatgtttgtataaattttttaaaggattat
ggtcatgtagagataacaattggttatacaaaagttatatgtaaaataacaagtgaaatt
gtaaaaccacatgataggaaattaaaagaagggatgttaaaaataaatttagatatagat
aattctattgatgaaaatgagaataatgataatatgagtgatgaatgtttagaaataaaa
aatattatagatagagtattaaaaactagtaatataataaattttgaatctttatgtatt
attccaggtaaaaaagtatggtgtatatatataaatattatggttatagaaaatgatggg
aatttaacagatgcttgttatttatcagcttattgtggtttagtccattttaagaatcat
caagttaaagtaataaaaaatggaaatataataatagataaagaagacataaattattct
cctttatcaatattaaattctccaattgttactacctttgctttttatgaagaagaagat
gtttgtttaatcgatccttgtttatatgaagaagaatttatgtcttctaaaatatctatt
gcattaaataaaaatggtaatttaataagtttattaaaaccagggggaatacctttagct
tgttcacatattatggaatctattgaaatagccaaaaaaagaatacttacaattttgaaa
atattagaagatactttagaagaggacaaaaatataaggaattatctaaataaaagaaat
ctacatgttaaatactcatcccttcctgtaaccattaaatatgataattcttttaaactt
aaaccagatatctcattagaaagatatacaaaaaattcccaaatttttgaagatactata
aaaaaaattgaagaatacataaaatataatcaagtacaggaatgtctaaataatatgaat
gtaaaacttcaagaaaataatgaagatgcaatagatatatacaccttaaatagagaaggt
aatctaaatgagtatcataattttaatgaacaagataataaaagatatactaatgaaaat
ataaatataaataaacacaatataaataatcagaattctattgatcctatgaaaaatact
aatttattaaatcctaaagatatagcaataataaaaagacaagaatttttggataaccat
tatgatgcaaataataataataataataataataataagtataacaaacaagcaaataaa
acattcaaaaaagaacttatcgatttctcaaattcatttacaaaaggtcataataaaagt
aataatttctctgataatcaaaacgatatttgtgaacagcatgataactcacaagagtca
agtgatgatgtctcaaccataagaagtgacgaatcatcagatattgatttttccgttgcc
attaatcaaaatttaaaaaagaaaaaataa
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