KEGG   Plasmodium gaboni: PGSY75_1364800
Entry
PGSY75_1364800    CDS       T08136                                 
Name
(RefSeq) putative DNA-directed RNA polymerase II
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pgab  Plasmodium gaboni
Pathway
pgab03020  RNA polymerase
pgab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PGSY75_1364800
  09124 Replication and repair
   03420 Nucleotide excision repair
    PGSY75_1364800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgab03021]
    PGSY75_1364800
   03400 DNA repair and recombination proteins [BR:pgab03400]
    PGSY75_1364800
Transcription machinery [BR:pgab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PGSY75_1364800
  RNA polymerase III system
   RNA polymerase III
     PGSY75_1364800
  RNA polymerase I system
   RNA polymerase I
     PGSY75_1364800
DNA repair and recombination proteins [BR:pgab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PGSY75_1364800
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat FACT-Spt16_Nlob
Other DBs
NCBI-GeneID: 29778256
NCBI-ProteinID: XP_018640409
UniProt: A0A151LEJ7
LinkDB
Position
13:complement(<2280195..>2281651)
AA seq 205 aa
MEDPITRFYKCRKTCCEMLEDRGYIITPREKLENFSSFKEMFEDNDRQRSKMGISTSHKN
DANNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAIKEAAPRH
IIENFLDTELLVNITKHELVPRHIPLTSEEKKNLLQRYKIMENKLPRIQDVDPVCRYFGL
SKGQVVKIIRPSETAGRYVTYRLVV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggaagatccaataacaagattttataaatgtagaaaaacttgttgtgaaatgttggag
gataggggttatattataactccacgagaaaaacttgaaaacttttcatcttttaaagaa
atgtttgaagataatgatagacaacgatctaaaatgggtattagtactagtcataaaaac
gatgcaaacaatagaattatagtttactttgcagatgaagttaaaaaaacaggggttaaa
ccattaagggaattaactgaaaggatggaagaaaaatctattcagcgtgctattcttgta
acacaaaatatattaacaccttttgctagagatgccattaaagaagcagcaccaagacat
attatagaaaactttttagatactgaattattggttaatataacaaagcacgaattagtc
ccaagacatattcctctaacaagcgaagaaaaaaaaaacttgcttcaaagatataagatt
atggaaaataaattaccgagaattcaagatgtcgaccctgtatgtcgatattttggatta
tcaaaaggacaggttgttaaaattattaggcctagtgaaacggcaggaagatatgttacc
taccgattggttgtgtaa

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