Plasmodium gaboni: PGSY75_1443300
Help
Entry
PGSY75_1443300 CDS
T08136
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pgab
Plasmodium gaboni
Pathway
pgab03018
RNA degradation
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_1443300
09123 Folding, sorting and degradation
03018 RNA degradation
PGSY75_1443300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_1443300
03041 Spliceosome [BR:
pgab03041
]
PGSY75_1443300
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PGSY75_1443300
mRNA degradation factors
5'-3' decay
Lsm complex
PGSY75_1443300
Spliceosome [BR:
pgab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PGSY75_1443300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
29778721
NCBI-ProteinID:
XP_018639491
UniProt:
A0A151LAN2
LinkDB
All DBs
Position
14:<1603886..>1604511
Genome browser
AA seq
101 aa
AA seq
DB search
MATISGSETFLPLALMDKCIGSKIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEYTYANN
IKKVNKIKKLLLNGLNITIMVPGGTPVNYYDYEEKLEENIA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggctacaattagtgggtcagaaacatttttacccttggctttaatggataagtgtatt
ggaagtaaaatatggataatgatgaaaggtgataaagaaattgtaggtaaattggttggc
ttcgatgaatatgtaaatatggtattagaagatgttacagaatacacgtacgcaaataat
attaaaaaagtaaataaaataaaaaaattattattaaatggattaaatataactattatg
gttccaggaggaactccagtgaattattatgattatgaagaaaagttagaagaaaatata
gcataa
DBGET
integrated database retrieval system
