Plasmodium gaboni: PGSY75_1454100
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Entry
PGSY75_1454100 CDS
T08136
Name
(RefSeq) putative tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pgab
Plasmodium gaboni
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgab03016
]
PGSY75_1454100
Enzymes [BR:
pgab01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PGSY75_1454100
Transfer RNA biogenesis [BR:
pgab03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PGSY75_1454100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Orthopox_F6
Motif
Other DBs
NCBI-GeneID:
29778827
NCBI-ProteinID:
XP_018639596
UniProt:
A0A151LAZ0
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All DBs
Position
14:<2028304..>2028833
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AA seq
97 aa
AA seq
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MIFKNRKREIVFNELNKLFIVVDGFKYGADFVLYKNNVHEEHGFALVFIKEENTCLNEKE
KNIIVRICESVKKKAIIAFINEDNETIRYEEVVRKRK
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgatatttaaaaatagaaaacgagaaatagttttcaatgaattgaataaacttttcatt
gtagttgatggttttaaatatggagcagattttgtactatataaaaataatgttcacgaa
gaacatggatttgctctagtttttataaaggaggaaaatacttgcttaaatgagaaagaa
aaaaatataattgttagaatatgtgaaagtgttaaaaaaaaggcaattattgcttttatt
aatgaagacaacgaaactataagatacgaagaagttgttagaaagagaaaatga
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