Photobacterium gaetbulicola: H744_1c0277
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Entry
H744_1c0277 CDS
T03698
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_1c0277
Enzymes [BR:
pgb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
H744_1c0277
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
H744_1c0277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AJR05302
UniProt:
A0A0C5WGI1
LinkDB
All DBs
Position
1:complement(319872..321437)
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AA seq
521 aa
AA seq
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MSAVRFKTLRLILGDQLNAEHSWYSRADETTLYLIAELHQETGYVTHHIQKVSAFFAAME
HFANHLKLKGHQVTYLSLDQSAQFADLPNLIVSLLKQHQCTHFEFQRPDEYRLYEQLHSL
AGTLSQTGFYCREWDTEHFLLPFSEIEADFPAGKHILMEHFYRRMRKRFNLLMEDNQPLG
GKWNFDQSNRNKLKANELKDIPAPLCFANDVSAILSRIESHHIATIGHAQPQLLWPVTAS
QAKALLDFFCRHCLARFGYFQDAMTENSPHSWSLYHSRLSFALNCKLISPKDVIEQAINA
YELNSAINIAQIEGFVRQILGWREYVRGIYWGNMPNYSQTNALKATRRLPDFFWTGKTKM
ACMKAAITQSLDYAYAHHIQRLMVTGNFCLLAGIAPDEVEQWYLGIYIDAIEWVEMPNTR
GMALFADNGIIATKPYAASGNYINKMSDHCKHCFYDVKTKTEANSCPLNSLYWNFLHKND
TWLAKNPRTRMIYRSWDNMSEEGRTSTLSKANSLLANINTL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagtgcgatttaaaacactcagattaatcctcggcgaccaattaaacgcagag
cactcttggtatagccgcgccgatgaaactaccctatatctaatcgccgaacttcatcaa
gaaacaggctatgtcactcatcatatacagaaagtatctgctttttttgctgccatggag
cattttgctaaccatctgaagctgaagggacatcaagtcacttatcttagcctcgaccaa
tccgcacagtttgcggatctacccaatctcattgtcagtctactgaagcagcatcaatgt
acacatttcgaattccagcgccccgacgagtacagattgtatgaacaattacattcactt
gccggcacccttagccaaactggcttttattgcagggaatgggacaccgaacatttcctc
ttgcctttcagtgagattgaagctgatttcccagcaggaaagcacatattaatggagcat
ttttaccgtcgtatgagaaaaagatttaacctcctgatggaggataaccagccgctcggg
ggaaagtggaattttgatcaaagcaaccgtaacaaactcaaagccaatgagctaaaagac
atccctgctccgctctgttttgccaatgacgttagcgccatcttaagcaggattgaatcg
caccatatcgccactatcggccatgcccaaccgcaattactctggccagtcaccgccagc
caagccaaagcactgttggatttcttttgccgccactgcttagcgcgatttggctacttc
caagatgccatgacggagaatagcccgcacagttggagcttgtaccactcacgactatca
ttcgctttgaactgcaagcttatctctcccaaagacgttatcgaacaggcaattaacgcc
tacgagctgaatagcgcgataaacattgcccagatagaaggcttcgtcaggcagattttg
ggctggcgagagtatgttcgtggcatctattggggcaatatgcccaactacagccaaaca
aatgccttaaaggccacccgccgcctaccggattttttctggacagggaaaaccaaaatg
gcttgtatgaaagcagcaattacacaatctttggactatgcctatgcccaccacattcag
cgcttaatggtaacgggtaatttttgtttattggctggcatagcccctgatgaagtagag
cagtggtacctggggatatacatcgatgccatcgagtgggttgaaatgcccaatacgcgc
ggtatggcactctttgccgacaatggcatcattgccactaaaccttatgcggccagtgga
aactatatcaacaaaatgagcgaccattgcaaacactgcttttatgatgtcaaaacaaaa
acagaagcaaattcatgcccattaaatagtttatattggaattttcttcataagaatgat
acctggctagcaaaaaatcccagaaccaggatgatttaccgaagttgggataatatgtct
gaagaaggacgaacatctaccttaagcaaggctaatagcttattagcaaatataaacact
ctttag
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