Photobacterium gaetbulicola: H744_1c0921
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Entry
H744_1c0921 CDS
T03698
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_1c0921
Enzymes [BR:
pgb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H744_1c0921
DNA repair and recombination proteins [BR:
pgb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H744_1c0921
Prokaryotic type
H744_1c0921
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AJR05946
UniProt:
A0A0C5W3E3
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All DBs
Position
1:complement(1078027..1079457)
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AA seq
476 aa
AA seq
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MSQHKHIGLVWFRADLRVVDNTALFIAAEQCDQLIALYVSTPMQWHEHHVAPIQVDLLRR
RLPILQQQLEALGIPLIFKEVADFEQIPQTLLEVSSKHGVSHVFCNKQYEWNELQRDDKT
GHRLAQEQVKFSVFDDSCVIAPGKVQTQKGEAFKVFTPFRREWLKQFRALSPTPLPIPEP
VENPVVVDEPGQITVTYPSSDSMAWPVEEETIRQRLVTFCYEKVEDYHQQRDIPAIDGTS
CLSPYLALGMLSPRQCIAVLMAVSPMCLDAPESGAFSWLNEIIWREFYRHLLVAYPDLCR
GQPFQSWTQNVQWQQSSELLSAWQHGLTGFPIVDAAMRQLNQTGWMHNRLRMITASFLTK
DLLIHWQAGEQWFMSKLIDGDFASNNGGWQWAASTGTDAQPYFRVFNPTTQGERFDPKGE
FIRTWLHELKDVPDKYIHQPHLWPGSEQIHYPKPIVDHKQARLLAISSFKIAKEAQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcataaacatattggcctggtttggttccgcgctgacttgcgtgtggtggat
aacaccgctttgtttattgcggcagagcaatgtgatcagcttatagccttgtatgtatcc
acgccgatgcagtggcatgaacatcatgttgccccgatacaggtggatttgcttcgtcgc
cgactgccaattttgcagcagcaactggaagcgcttggtatcccacttattttcaaggaa
gtcgctgattttgagcagatcccacaaaccttgcttgaggtatcgagcaagcatggtgtc
tcgcatgttttttgcaacaagcaatacgaatggaacgagctccagcgcgatgacaagacg
ggccatcgcctagcccaagagcaggtcaagtttagtgtatttgacgatagttgtgtgatt
gcaccaggcaaggtgcaaacgcaaaaaggcgaggcatttaaggtctttacacctttcaga
agagaatggctaaaacagttccgggcattatcgccaacaccgctgcctattccagagccg
gttgaaaatccggtggttgttgatgaacctggccaaatcacggtgacctatccatcttca
gacagtatggcatggccggtcgaggaagagaccattcgccagcgtctagtgacattttgc
tatgaaaaagtcgaagactatcatcaacagcgagatatccctgccatagacgggacaagt
tgcttgtctccttatctggctctggggatgttgtccccgcgccagtgcatagcggtactg
atggcggtgagcccaatgtgtttggatgcgcctgaaagtggggcatttagttggttaaat
gaaataatttggcgtgaattctaccgtcatcttctggtggcataccctgatttgtgccgc
ggccaaccttttcagtcctggacccaaaatgtgcagtggcagcaatcaagcgagttgttg
tcagcctggcagcacgggctaacgggctttccgattgtggatgccgcaatgcgtcagctg
aaccaaacaggctggatgcacaatcggctgcggatgatcactgccagtttcctaactaag
gatctgctgattcattggcaagccggggagcagtggtttatgtcaaagctaatcgatggt
gattttgcatccaataacggtggatggcagtgggccgcttcgaccgggacagacgcacag
ccttactttagggtgtttaatcccactacccaaggagaacgttttgatccaaaaggagaa
tttattcgtacttggttgcatgagttaaaggacgtgccggacaaatatattcaccagcca
cacctttggccaggtagcgagcagattcattaccccaaacccattgttgaccacaaacag
gcaaggcttttggcaattagctcattcaaaattgccaaagaagctcaatag
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