Photobacterium gaetbulicola: H744_1c1623
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Entry
H744_1c1623 CDS
T03698
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb00040
Pentose and glucuronate interconversions
pgb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H744_1c1623
Enzymes [BR:
pgb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
H744_1c1623
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GFIT
Motif
Pfam:
Pectate_lyase22
PD40
TTC3_DZIP3_dom
Motif
Other DBs
NCBI-ProteinID:
AJR06641
UniProt:
A0A0C5W562
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All DBs
Position
1:complement(1887462..1888628)
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AA seq
388 aa
AA seq
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MAKGNVIDLSFEVFEDSDTGVKVTRLTPKGMTCHRNYFYQKCFTNDGTKLLFAGDFDGNR
NYYLLDLEKQQATQLTEGAGDNTFGGFISTDEKSFFYVKNELHLMKVDLETLEESVIYTV
DSEWKGYGTWVANSDCTKLVGIEILKSCWKPLTDWQKFQDFYHTNPTCRLIKVDIQTGEL
EVVHQDDAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC
THEFWIPDGSAMAYVSYFKGQTDRVIYKADPVTLENEEVMVMPPCSHLMSNFDGSLMVGD
GCDAPVDVADSDGYNIENDPFLYILNTKTKTSTRLAKHSTSWEVLDGDRQITHPHPSFTP
DDSGVLFTSDFEGVPSLYIAEIPEQLRS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtaacgtaatcgacctgagctttgaggtttttgaagacagtgatactggg
gtgaaagtgactcgccttaccccgaaaggtatgacttgccaccgtaactacttttaccaa
aagtgttttactaatgatggtactaagttactttttgccggtgacttcgatggtaatcgt
aactactatttgttggatctagaaaagcagcaagctacacagctgactgaaggcgcaggc
gacaatacgtttggcggtttcatttcaacggatgagaaaagcttcttttatgtgaagaac
gagttacacctgatgaaggtggatctagagacgctggaagagagcgttatctataccgtt
gacagcgaatggaaaggttacggtacgtgggtggctaattctgactgcaccaagcttgtc
ggtatcgagattttgaaatcgtgctggaagccattgacagattggcagaaattccaagac
ttctatcataccaacccaacgtgccgcttgattaaggttgatatccagacgggtgaactg
gaagttgttcatcaggatgatgcgtggctgggccacccaatctaccgtccttttgacgat
tcgacggttggcttctgccatgaagggccgcatgatcttgtggatgcgcgcatgtggctg
gttaatgaagacggttcgaacgttcgtaaaatcaaagagcatgccgaaggcgagtcttgt
actcacgagttctggatcccagacggttcggcgatggcctatgtttcttacttcaagggc
cagacggatcgcgtcatttacaaagctgatccggtgacgcttgaaaatgaagaagtcatg
gtgatgccgccctgttcacacttgatgagtaacttcgatggttctttgatggtcggtgat
ggctgtgatgcgccagtggatgtggctgatagcgacggttataacattgagaatgacccg
ttcctttacatcttgaacaccaagaccaaaacgtcgactcgcctggcgaagcactcgact
tcttgggaagtgctagatggtgaccgccagatcactcacccgcacccttcatttacgcct
gatgacagtggcgtgttgttcacgagtgattttgagggcgttccgagtctgtatattgca
gaaattccagagcagcttagatcatag
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