Photobacterium gaetbulicola: H744_1c1650
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Entry
H744_1c1650 CDS
T03698
Name
(GenBank) putative exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03030
DNA replication
pgb03430
Mismatch repair
pgb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H744_1c1650
03430 Mismatch repair
H744_1c1650
03440 Homologous recombination
H744_1c1650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgb03032
]
H744_1c1650
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_1c1650
Enzymes [BR:
pgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H744_1c1650
DNA replication proteins [BR:
pgb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H744_1c1650
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H744_1c1650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJR06668
UniProt:
A0A0C5WHQ0
LinkDB
All DBs
Position
1:complement(1917505..1918251)
Genome browser
AA seq
248 aa
AA seq
DB search
MKRVLSYFKPLNRLSRGQAKWRDTYATRASAERVVNLLGPGLPAPDSTLLDLDILCLDFE
TTGLNPGKDQILSIGYVEMQKGMLNLSSSEETFIKDSCGINAHTAIINQITPEMLTSGQA
LDEAMEALFERMAGKVVLVHGLSVEKSFLEHYVQQRVGIPLPPLLWLDTLLIEKMLVTNR
HMREEGDYRLSSIRQRYGLPEYPSHGALIDAVATGELLLALMTKCFGHSSPRLEEVYDLH
HYELTMSQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtgctgtcgtatttcaagccgctgaaccgcctttccagggggcaggccaaa
tggcgtgatacttatgctacccgagccagtgccgagcgggttgtcaacttgctcggtccg
gggctgccggccccggacagcaccttgctggatctcgatattctctgcctcgactttgaa
accacgggcctgaaccccggcaaagatcagatcctgagtatcggctatgtcgagatgcaa
aaggggatgctcaacctcagcagcagtgaagaaacatttatcaaggacagctgcggcatc
aatgcccatacggccattatcaatcaaattaccccggaaatgctgacatctggccaagca
ctcgatgaggcgatggaagccttgtttgaaaggatggcgggcaaggtggtgctggtccat
ggcctgtcggtcgagaagtcgtttctcgagcactatgtgcaacaaagggttgggatcccg
ttgccgccactactgtggctcgataccttgctgattgaaaagatgctggtgaccaaccgc
cacatgcgcgaagaaggggattatcggctgtcctctatccgtcagcgctatggcctgccg
gagtacccgagccacggggcgctgatagatgcagttgcaacgggggagttgttgttggca
ttgatgaccaagtgcttcggtcatagttcaccaaggctggaggaggtgtatgacctgcac
cactatgagctgacgatgagtcagtga
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integrated database retrieval system
