Photobacterium gaetbulicola: H744_2c0067
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Entry
H744_2c0067 CDS
T03698
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
H744_2c0067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgb03019
]
H744_2c0067
03009 Ribosome biogenesis [BR:
pgb03009
]
H744_2c0067
Messenger RNA biogenesis [BR:
pgb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H744_2c0067
Ribosome biogenesis [BR:
pgb03009
]
Eukaryotic type
Pre-60S particles
RNases
H744_2c0067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJR06829
UniProt:
A0A0C5WP52
LinkDB
All DBs
Position
2:complement(62894..63439)
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AA seq
181 aa
AA seq
DB search
MMISDQNLIWIDLEMTGLDPETHKIIEIATIVTDAQLNVLAEGPVLAIHQPEAELTKMDE
WCTTTHTNSGLVERIRKSLVSEDEAVRQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHM
PELEQYFHYRYLDVSTLKELTRRWKPEVLDGFSKKGSHLALDDIRDSIAELRYYREQIMK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcagcgatcagaaccttatttggatcgacttagaaatgactgggttggatccc
gaaacccataaaatcattgaaattgcgacaattgtgaccgatgcgcagctcaatgtcctg
gctgagggaccggtactggcgattcaccagcctgaagctgaattgaccaagatggatgaa
tggtgcaccaccacccataccaacagcggtttggttgagcggatccgtaagagcctggtt
agcgaagacgaagcggtacgccagaccatcgccttcctggagcagtgggttccgaaaggg
gcatcacctatttgtggtaatagtattggtcaggatcgtcgttttctctataagcacatg
cctgagttggagcagtatttccattaccgctatttggatgtcagtacccttaaggagctg
acgcgccgctggaaaccagaggtgttagatggttttagcaagaagggcagccacttagcg
ttggatgatattcgcgactcgatcgccgaattgcgctactatcgtgagcagatcatgaaa
atttga
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