Photobacterium gaetbulicola: H744_2c0101
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Entry
H744_2c0101 CDS
T03698
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03030
DNA replication
pgb03430
Mismatch repair
pgb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H744_2c0101
03430 Mismatch repair
H744_2c0101
03440 Homologous recombination
H744_2c0101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgb03032
]
H744_2c0101
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c0101
Enzymes [BR:
pgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H744_2c0101
DNA replication proteins [BR:
pgb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H744_2c0101
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H744_2c0101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AJR06863
UniProt:
A0A0C5WIB0
LinkDB
All DBs
Position
2:105791..106426
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AA seq
211 aa
AA seq
DB search
MMINTLKRWWYRHKFKDSEYRDLFSRYRGTELVSLDCETTSLDPHSAELVTIAATRIQDN
RILTSQSIHLTLRAPASLDAGSVAIHRIRHQDLNQGMEESQALEKLLAFIGNRPLVGYHI
RYDKTILDRYFRRHFGFPLPNKTVEVSHLYHEQLERQLPNAYFDLSLEAISRHLDLPVPP
RHDALQDAIAAAMIYVRLKHGDLPHPVARQA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaataccctcaaacgctggtggtaccgccataaattcaaggacagtgagtac
cgcgacctattttcccgctaccgcggcaccgagctggtctcgctcgactgcgaaaccacc
agcttagatccgcacagtgccgagctggtcaccatcgcggcgacccggatccaggataac
cgcatcctgaccagccagtctatccacctgaccctgcgcgcaccggccagcctcgatgcc
ggctcggtggccatccaccgcatccgccaccaggatctcaaccagggcatggaagaaagc
caggcgctggaaaagctgctggcctttatcggcaaccgcccgttggtcggctaccatatc
cgctatgacaaaacgatccttgaccgctatttccgccgccacttcggtttcccgctgccc
aacaagaccgtcgaggtcagccacctctaccacgagcagctcgagcgccaactgcccaat
gcctattttgaccttagcctcgaggccatcagccgccacctcgacctgccggtaccgccg
cgccacgatgccctgcaggatgccattgccgctgcaatgatctacgttcggctaaaacac
ggtgatctacctcaccctgttgccagacaagcctga
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