Photobacterium gaetbulicola: H744_2c0208
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Entry
H744_2c0208 CDS
T03698
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03030
DNA replication
pgb03410
Base excision repair
pgb03420
Nucleotide excision repair
pgb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H744_2c0208
03410 Base excision repair
H744_2c0208
03420 Nucleotide excision repair
H744_2c0208
03440 Homologous recombination
H744_2c0208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgb03032
]
H744_2c0208
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c0208
Enzymes [BR:
pgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H744_2c0208
DNA replication proteins [BR:
pgb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H744_2c0208
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H744_2c0208
NER (nucleotide excision repair)
GGR (global genome repair) factors
H744_2c0208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
HHH_2
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
AJR06961
UniProt:
A0A0C5W631
LinkDB
All DBs
Position
2:complement(216943..219711)
Genome browser
AA seq
922 aa
AA seq
DB search
MATIPENPLILIDGSSYLYRAYHAAPNFTNSDGEPTGAVYGVVNMLRSMLRQFSTEHIAV
IFDAKGKTFRDEMYPEYKANRPPMPDDLRSQIEPLHAVIKAMGLPLISISGVEADDVIGT
LACQASKAGMPVLISTGDKDMAQLVDQNITLINTMTDVVMDPAGVVDKFGIGPELIIDYL
ALMGDKVDNIPGVPGVGEKTAKALLTGIGGLDALYANLDDIPALGFRGSKTMPKKLLEHK
DAAYLSYELATIKLDVELDVTPDQLVKTTPDTDELTKLFGQLQFRRWLAEMLDGSDGRIV
ADEKSAAPAAAKPVAPVIDRSGYETVLDEAVFSQWLEKLSAAEVVAFDTETDGLDYMTAN
LIGVSFAVEEGKAAYVPVAHDYLDAPAQLNRDWVLAQLKPLLEDPSKDKVGQNLKFDASI
LARYGIEMQGIRFDTMLESYVFNSVVGRHDMDSLSLRYLEHKTISFEDIAGKGKKQLTFN
QIDLEQAGPYAAEDADITLRLHNVLVEKVNADEKLKSVFEDIEMPLVPVLSRMERTGVLI
DSMLLGAQSTEIAARLDELEKQAFEVAGEEFNLSSPKQLQAILFEKMGLPVLKKTPSGTP
STNEEVLQELALDYPLPKLILEYRSLAKLKSTYTDKLPKMVNPATGRVHTSYHQAVTATG
RLSSSDPNLQNIPVRNDEGRRIRQAFIAPTGYKVLAVDYSQIELRIMAHLSGDQALLDAF
NHGKDIHAATAAEILGIPLESVTSEQRRRAKAINFGLIYGMSAFGLAKQLDMGRNEAQDY
MNVYFERYPGVLEYMESTRNQASEQGYVETLFGRRLHLPDIKSRNGMRRKAAERAAINAP
MQGTAADIIKRAMVMVDEWVGLQPEGRVRLLMQVHDELVFEVQESEVDNVSAEVRRLMES
AAELAVPLIADAGIGDNWDQAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatcccagaaaatccacttattctgattgatggatcatcttatctttatcgt
gcctaccatgctgcgcctaacttcactaattcagacggtgagcctaccggtgcggtttat
ggtgtggtgaacatgctgcgcagtatgttgcgtcagttttccaccgagcacattgccgtc
atctttgatgcgaaaggaaaaacattccgagatgagatgtatccggaatataaggctaac
cgtccgccgatgccggatgatcttcgctcgcagatcgagccgcttcatgccgttatcaag
gccatgggcctgccgctgatttcgatttccggggtggaagctgatgacgtgattggtacc
ttggcctgccaggcttcgaaagccggcatgccggtgttgattagtaccggtgataaagat
atggcccagctggttgatcagaacattaccttgatcaacaccatgaccgacgtggtgatg
gatccggccggggtggttgataaatttggtatcggccctgagctgattatcgactacctt
gccctgatgggggataaggtggataacatcccgggcgtgccgggtgtcggcgagaagacg
gccaaggccctgctgaccgggatcggcggcctggatgccctgtatgccaatcttgacgat
attccggcgctgggtttccgtggctcgaaaaccatgccgaaaaagctgcttgagcataaa
gacgcggcgtacctgtcttacgagctagccaccatcaaactcgatgtcgagctcgatgtc
accccggatcagctggtgaagaccacccctgacactgacgagctgaccaagctgtttggc
cagttgcagttccgtcgctggctggctgaaatgcttgatggcagtgatggccgcattgtg
gccgatgaaaaatcagccgcgccggcagcagccaagccggtcgcccctgtaattgaccgc
agtggctacgaaacggtgttggatgaggcggtattcagccagtggctggaaaagctgagt
gcagcagaggtcgttgcgtttgatactgagaccgacggcttggattatatgacagccaac
ctgattggcgtgtcgtttgcggtcgaagaaggcaaagcggcttatgtgccggttgcccac
gactacctggatgccccggctcagcttaaccgtgactgggtgctggcccagctcaagcca
ttgctggaagatccaagcaaagacaaggttggccagaatctcaagttcgatgccagtatt
cttgcccgctacggtattgagatgcaggggatccgcttcgataccatgctggagtcttac
gtgttcaacagcgtggtgggccgccatgacatggacagcctgtcgctgcgctaccttgaa
cacaagaccatcagcttcgaagatattgccggcaagggcaagaagcagctgaccttcaac
cagatcgatctggaacaggctggcccttatgcagcagaagatgccgacattaccctgcgc
ctgcataacgtactggttgaaaaagtaaatgctgatgagaagctgaagtcggtattcgaa
gatattgaaatgccgctggtgccggtcttgtcgcgcatggaacgtaccggggtgctgatt
gacagcatgctgcttggtgcgcagtcgaccgagattgccgcgcgccttgatgaactcgaa
aagcaagcttttgaagttgcaggcgaggagttcaacctgagttcgccgaagcagcttcag
gctatcctgtttgagaaaatgggtctgccggtactgaagaaaaccccatcgggtaccccg
tcgaccaatgaagaggtactgcaggagttggcgctggattacccgttgccgaaactgatc
ttggaatatcgtagtctggcgaaactgaagtcgacctataccgacaagcttccgaagatg
gtgaacccggcgacaggccgcgtccatacttcttatcatcaggccgtgaccgcgacgggg
cgcttgtcatcaagtgatcctaacctgcagaacattccggttcgaaacgatgaggggcgt
cgtattcgccaagcctttattgcaccgaccggctacaaggtactggcggtcgactactcg
cagattgagctgcgtatcatggcgcacctgtcgggtgatcaggctctgctagatgccttt
aaccacggtaaggatatccatgctgcgaccgctgccgagattttggggatcccgcttgaa
tccgttaccagcgagcagcgccgccgtgccaaggcgattaacttcggtctgatttacggc
atgagtgccttcggtctggccaagcagctggatatgggccgtaacgaagcgcaggattac
atgaatgtgtacttcgagcgctacccgggtgtgctggaatacatggaaagcacccgcaac
caagccagcgagcaagggtatgtcgaaaccctgtttggtcgtcgtttgcatctgcctgat
atcaagtcgcgaaacggcatgcgacgcaaagcggcagagcgtgctgcgattaatgccccg
atgcagggtaccgctgccgatattatcaagcgggcgatggtgatggtcgatgagtgggtt
ggcctgcagccggaaggccgggtccgcctactgatgcaagttcatgacgaacttgtattt
gaggtacaggagtcggaggttgacaacgtttctgctgaagtccgccgcttgatggaatct
gccgccgaattggctgttccgctgattgcggatgccgggatcggggataactgggatcag
gcgcactaa
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