Photobacterium gaetbulicola: H744_2c0227
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Entry
H744_2c0227 CDS
T03698
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb00300
Lysine biosynthesis
pgb00470
D-Amino acid metabolism
pgb01100
Metabolic pathways
pgb01110
Biosynthesis of secondary metabolites
pgb01120
Microbial metabolism in diverse environments
pgb01230
Biosynthesis of amino acids
Module
pgb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H744_2c0227
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H744_2c0227
Enzymes [BR:
pgb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H744_2c0227
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AJR06980
UniProt:
A0A0C5WV54
LinkDB
All DBs
Position
2:complement(237889..239142)
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AA seq
417 aa
AA seq
DB search
MDYFNYQKDGQLWAEEIPLAELADRFGTPLYVYSRATLERHWHAFDQAVADHPHLICYAV
KANSNIGVLNVLARLGSGFDIVSGGELERVVAAGGDPAKVVFSGVGKTAAEMKRALELGI
KCFNVESEPELERLNQVAGELGKVAPVSLRINPDVDAQTHPYISTGLRDNKFGIAFDRAP
EVYRLAHGLPHLEVTGMDCHIGSQLTAIAPFIDATDRLLALIDTLKAEGIAIHHLDVGGG
LGVTYSDERPPQPSEYAKALMDRLTAHRDLELVFEPGRAIAANAGVMLTRVEYLKHTEHK
NFAIVDAAMNDMIRPTLYQAWQDIVPVVPRDGDKVTYDLVGPICETGDFIGKERPLCLET
GDLLAVRSAGAYGFVMSSNYNTRVRAAEIMVDGTQAHVVREREELAQLWQSEHLLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattactttaattatcagaaagatggccagctatgggccgaagaaattccactggcc
gaattggctgaccgttttggcactccgctctatgtgtattcgcgtgcgacgctggaacgt
cattggcatgcctttgatcaggcggtggccgatcatccccacctgatctgctatgccgtc
aaggccaactccaacatcggtgtgctcaatgtgctggcacgcttgggctcgggcttcgat
attgtctcgggcggtgagctggagcgggtggtggccgccggtggcgatccggccaaggtg
gtgttctccggtgtcggcaagacagcggcagaaatgaagcgggccctggagcttggcatc
aagtgcttcaatgtagaatccgaacctgagctggagcgccttaaccaggtcgcaggcgag
ctgggtaaggtggcaccggtatcgctacggatcaacccggatgtcgatgcccagacccac
ccgtacatttcgaccggcctgcgcgacaacaaattcgggattgcttttgaccgggcgccg
gaagtataccgcttggcccacggcttgccgcatctggaagtcacggggatggactgccat
atcggctcccagctgacggcgattgcgccgtttatcgatgccaccgaccgcctgctagcg
ctgattgacaccctcaaggcggaaggtattgccatccaccacctcgatgtcggtggcggc
ctgggagtgacctatagcgatgagcgcccgccgcagccatcggaatatgccaaggcgttg
atggaccgcttgacggcgcaccgtgacttggagctggtcttcgagccgggccgtgccatt
gccgctaatgccggggtgatgttgacgcgggtggaatacctcaagcataccgaacacaag
aactttgccattgtcgatgcggcgatgaacgatatgatccgcccgaccctctaccaggcg
tggcaggatatcgtgccggttgtgcctcgcgacggtgataaggtgacctatgacttggtc
ggcccgatttgcgaaaccggtgactttatcggtaaagagcgcccattgtgtctggagacc
ggtgacttgctggccgtccgctcagcgggggcctatggtttcgtgatgtcatcgaactat
aacacccgtgtgcgtgcggcggagatcatggttgatggtacccaggcccatgtggtgcgc
gagcgtgaagagttggcgcagctgtggcagtctgagcatctgctgccggaataa
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