Photobacterium gaetbulicola: H744_2c0322
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Entry
H744_2c0322 CDS
T03698
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgb03032
]
H744_2c0322
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c0322
Enzymes [BR:
pgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H744_2c0322
DNA replication proteins [BR:
pgb03032
]
Prokaryotic type
DNA Topoisomerases
H744_2c0322
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H744_2c0322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJR07066
UniProt:
A0A0C5W6B6
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All DBs
Position
2:336790..339204
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AA seq
804 aa
AA seq
DB search
MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCEDII
VTIHEDGSVSVSDDGRGIPTEMHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKVELTIHRGGSVHQQVYHHGEPQAPLGIIGETEKTGTRIRFWPSAETFSNIE
FQYEILAKRLRELSFLNSGVSIKLIDEREEDKQDHFMYEGGIRAFVEHLNRNKTPIHPKV
FHFEFTREDGIGVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNFMDK
EGYSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKPAVESTMGEKLSE
FLLENPADAKTVCTKIIDASRAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITAMGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIAQPPLYKVKK
GKQEQYIQDDEDMGQYQVALALDNAALFTAEGAPAISGEALESLVKQFNGATKLIERMSR
RYPTLMLNEFTYQPRLTAEMLNNEGDVEAWTKALVAALNAKQSGESQYSYAVVRDEELSL
YLPKVTVRTHGVEHEYLLSADLLNSKEYGKLASLSEALFELLEESAYVQRGERKQPVSSF
KEALEWLIKESRRGLSLQRYKGLGEMNPEQLWETTMDPETRRMMQVTINDAVAADELFTT
LMGDHVEPRRNFIEANALNANLDV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaactacgattcatcaagtatcaaggtacttaagggccttgatgcggtacgt
aagcgcccagggatgtatattggcgataccgatgacggtacaggcttgcaccacatggta
tttgaggtagtcgataactctatcgacgaagctcttgctggccactgtgaagatatcatt
gtcaccatccacgaagatggctctgtgtctgtgagtgatgatggtcgtggtattccgact
gaaatgcaccctgaagaaggcgtgtcggcggcagaagttatcatgacggtactgcacgct
ggtggtaagttcgatgacaactcgtacaaggtatccggtggtctgcacggggtaggtgtt
tctgttgttaacgccctgtctgaaaaagtcgagctgactatccaccgtggtggttctgtc
caccagcaggtgtaccaccatggtgagcctcaagcgccactaggtatcattggcgagacc
gagaaaaccggtacccgtatccgtttctggccgagtgcagagaccttcagcaatattgaa
tttcaatatgaaatcctggctaagcgcctgcgtgaactgtcgttcctgaactccggcgtg
tcaatcaagctgattgatgagcgtgaggaagacaagcaggatcacttcatgtatgaaggt
ggtatccgtgctttcgttgagcaccttaaccgcaacaaaacgccaatccacccgaaagtc
ttccacttcgagtttacccgcgaagatggtatcggtgtggaagtggcgatgcagtggaac
gatggtttccaagaaaacatctactgtttcactaacaacatcccgcagcgcgatggtggt
acccaccttgctggtttccgtggtgcactgactcgtaccctgaataacttcatggataag
gaaggctattcgaagaaagccaaaacggcgacatccggtgatgatgcccgtgagggccta
acggcggttgtatcggtgaaagtgccggatcctaagttctcaagccagacaaaagacaag
ctggtatcgagtgaagtgaagccggcggttgaatcgaccatgggtgagaagctgagcgag
ttcctgttggaaaacccagctgacgccaaaacggtatgtaccaagatcatcgacgcatca
cgtgcccgtgaagcagcacgcaaagcacgtgaaatgacccgccgtaaaggtgcgttggac
ttggctggtctaccgggcaaactggcagactgtcaggaaaaagacccagccctttctgaa
ctctacattgtggagggtgactctgcgggcggtagtgccaagcagggtcgtaaccgtaaa
aaccaggctatcctgccgctgaaaggtaagatcctgaacgttgagaaagcacgcttcgac
aagatgctgtcttctcaggaagtggcaacgcttatcaccgctatgggctgtggtatcggc
cgtgacgagtacaacccggataaactgcgttaccacaacatcatcatcatgaccgatgcc
gatgtcgatggttcccacatccgtacgctgctgctgacgttcttctaccgtcagatgccg
gagcttattgaacgtggtcatatctacattgcccagccaccgctttacaaagtgaagaag
ggcaagcaggagcagtacatccaggatgacgaggacatgggtcagtaccaggtagccttg
gcactggataacgctgcgctgtttaccgcggaaggtgcaccagcgatttctggtgaagcg
ctggagtcgttggtcaagcagtttaacggtgcaaccaagctgattgaacgtatgagccgt
cgttacccgaccttgatgcttaacgagtttacttaccagccacgtttgacggcagagatg
ctgaataacgaaggcgatgttgaagcttggactaaggcattggttgctgcgttgaacgcc
aagcaatctggcgagagccagtactcttatgcagtggttcgtgacgaagagctgagcctg
tacctgccgaaagtgaccgttcgtacccacggtgttgaacatgagtacctgctaagtgct
gatctgcttaactcgaaagagtacggcaagctggcatcattgtctgaagcgttgttcgag
ctgcttgaggagtctgcctacgtacagcgtggcgagcgcaagcagccggtaagcagcttc
aaagaagccttggagtggttgatcaaagagtctcgccgcggcctgtcgctacagcgatac
aaaggtctgggtgagatgaaccctgagcagctttgggaaacaactatggatcctgaaact
cgccgtatgatgcaggtaaccatcaacgatgccgttgctgcagatgagctgttcaccacg
ctgatgggtgatcacgttgagccgcgtcgtaacttcattgaggcgaacgcgctgaatgcg
aacttggacgtgtaa
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