Photobacterium gaetbulicola: H744_2c0600
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Entry
H744_2c0600 CDS
T03698
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H744_2c0600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgb03021
]
H744_2c0600
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c0600
Enzymes [BR:
pgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H744_2c0600
Transcription machinery [BR:
pgb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H744_2c0600
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H744_2c0600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4843
Motif
Other DBs
NCBI-ProteinID:
AJR07336
UniProt:
A0A0C5W744
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All DBs
Position
2:618459..619448
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVNTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVILTLNKSGAGPVVAGDITHDGD
VEIANPEHVICHLTDDNADISMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATFSPV
DRIAYAVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAATILAEQLDAFVDLRDVRVP
EEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgatattgaacaagttaac
acgacgcatgcaaaagtaactcttgagccgctagagcgtggtttcggccacactcttggt
aacgctctacgtcgtattcttctatcttcaatgccgggttgtgccgtaactgaagtagag
atcgacggtgtgttacacgagtacagcaccaaagaaggagtacaggaagacatccttgaa
atccttctaaaccttaaaggcctagccgttaaggttgagggtaaagacgaagttatcctt
actctgaataaatctggtgcaggccctgttgttgcaggtgacatcacccacgacggtgat
gttgagattgcgaacccagagcacgtaatctgccacctaactgatgacaatgctgatatc
agcatgcgcatcaaggtagagcgtggtcgtggctatgtaccagcgtcagctcgtattcac
actgaagaagacgagcgtccaattggtcgtctgctagttgatgcaactttcagcccagtt
gaccgtatcgcatacgccgttgaggcagcacgcgtagaacagcgtactgaccttgataag
ctagttatcgatatggagactaacggtactcttgatcctgaggaagcgatccgtcgcgca
gctactatcctagctgagcagctggatgcattcgtagatcttcgtgatgtacgtgttcct
gaagagaaagaagagaagccggagttcgatccgatcctactgcgtcctgtagacgatctt
gaactaactgttcgctctgctaactgtctaaaagcagaagcgatccactacatcggtgat
cttgttcagcgtactgaggttgagcttcttaagactccaaaccttggtaagaagtctttg
acagaaatcaaagacgtgctggcatcacgtggtctgtctctaggcatgcgcctagaaaac
tggccgccagcatctattgctgaagattaa
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