KEGG   Photobacterium gaetbulicola: H744_2c0816
Entry
H744_2c0816       CDS       T03698                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pgb  Photobacterium gaetbulicola
Pathway
pgb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pgb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    H744_2c0816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgb03019]
    H744_2c0816
   03009 Ribosome biogenesis [BR:pgb03009]
    H744_2c0816
   03036 Chromosome and associated proteins [BR:pgb03036]
    H744_2c0816
Enzymes [BR:pgb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     H744_2c0816
Messenger RNA biogenesis [BR:pgb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H744_2c0816
Ribosome biogenesis [BR:pgb03009]
 Eukaryotic type
  90S particles
   RNase
    H744_2c0816
 Prokaryotic type
  rRNA processing factors
   H744_2c0816
Chromosome and associated proteins [BR:pgb03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     H744_2c0816
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase SidE_mART DSRM_2
Other DBs
NCBI-ProteinID: AJR07538
UniProt: A0A0C5WK47
LinkDB
Position
2:850627..851301
AA seq 224 aa
MTTPANRLQRKLGYQFNNLDLLTLALTHRSANGTHNERLEFLGDSILSFVIADDLYHRFP
AVDEGDMSRMRATLVRGKTLAELGREFDLGDHLLLGPGELKSGGFRRDSILADCVEAIIG
AIYLDSDIENVRGIVLRWYQSRLETIKPGINQKDPKTRLQECLQGRRQPLPAYTVTKVHG
EAHNQEFTVQCEVAGLEKPVIGKGGSRRKAEQAAAEIALKQLES
NT seq 675 nt   +upstreamnt  +downstreamnt
atgaccactcctgcaaatagactccagcgtaagctgggctaccaatttaacaaccttgat
ttgctgaccctggcgctgacacaccgcagtgccaacgggacacacaacgaacgcctggag
tttctgggcgactcgatcctcagcttcgtgatcgccgatgatctttaccaccgcttccct
gcggtggatgagggcgacatgagccggatgcgtgccacactggtacggggcaagacgctg
gccgagttgggccgcgagttcgacctgggcgatcacttgttgctgggtcctggcgagctg
aaaagcggtggtttccgtcgcgattcgattctggccgactgtgtcgaggcaatcatcggt
gctatttatctagatagcgatattgaaaatgtacgtggcatcgtgctgcgctggtaccag
tctcgacttgaaacgatcaagccgggcatcaaccagaaagatccgaaaacccgtctgcag
gaatgcctgcaggggcgtcgccagccgttgccagcctatacggtgaccaaagtgcatggt
gaggcccataaccaagagtttacggtgcagtgtgaagtggcaggtttggagaaacctgtt
atcggtaaaggcggcagtcggcgcaaggcagagcaggcagcggcagaaattgcgcttaag
cagttggaatcatga

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