Photobacterium gaetbulicola: H744_2c0816
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Entry
H744_2c0816 CDS
T03698
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
H744_2c0816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgb03019
]
H744_2c0816
03009 Ribosome biogenesis [BR:
pgb03009
]
H744_2c0816
03036 Chromosome and associated proteins [BR:
pgb03036
]
H744_2c0816
Enzymes [BR:
pgb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
H744_2c0816
Messenger RNA biogenesis [BR:
pgb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H744_2c0816
Ribosome biogenesis [BR:
pgb03009
]
Eukaryotic type
90S particles
RNase
H744_2c0816
Prokaryotic type
rRNA processing factors
H744_2c0816
Chromosome and associated proteins [BR:
pgb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
H744_2c0816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
SidE_mART
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AJR07538
UniProt:
A0A0C5WK47
LinkDB
All DBs
Position
2:850627..851301
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AA seq
224 aa
AA seq
DB search
MTTPANRLQRKLGYQFNNLDLLTLALTHRSANGTHNERLEFLGDSILSFVIADDLYHRFP
AVDEGDMSRMRATLVRGKTLAELGREFDLGDHLLLGPGELKSGGFRRDSILADCVEAIIG
AIYLDSDIENVRGIVLRWYQSRLETIKPGINQKDPKTRLQECLQGRRQPLPAYTVTKVHG
EAHNQEFTVQCEVAGLEKPVIGKGGSRRKAEQAAAEIALKQLES
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcctgcaaatagactccagcgtaagctgggctaccaatttaacaaccttgat
ttgctgaccctggcgctgacacaccgcagtgccaacgggacacacaacgaacgcctggag
tttctgggcgactcgatcctcagcttcgtgatcgccgatgatctttaccaccgcttccct
gcggtggatgagggcgacatgagccggatgcgtgccacactggtacggggcaagacgctg
gccgagttgggccgcgagttcgacctgggcgatcacttgttgctgggtcctggcgagctg
aaaagcggtggtttccgtcgcgattcgattctggccgactgtgtcgaggcaatcatcggt
gctatttatctagatagcgatattgaaaatgtacgtggcatcgtgctgcgctggtaccag
tctcgacttgaaacgatcaagccgggcatcaaccagaaagatccgaaaacccgtctgcag
gaatgcctgcaggggcgtcgccagccgttgccagcctatacggtgaccaaagtgcatggt
gaggcccataaccaagagtttacggtgcagtgtgaagtggcaggtttggagaaacctgtt
atcggtaaaggcggcagtcggcgcaaggcagagcaggcagcggcagaaattgcgcttaag
cagttggaatcatga
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