Photobacterium gaetbulicola: H744_2c0969
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Entry
H744_2c0969 CDS
T03698
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgb01011
]
H744_2c0969
Enzymes [BR:
pgb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
H744_2c0969
Peptidoglycan biosynthesis and degradation proteins [BR:
pgb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
H744_2c0969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM_OapA
LysM3_NFP
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
AJR07674
UniProt:
A0A0C5WRG6
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All DBs
Position
2:complement(1019128..1020696)
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AA seq
522 aa
AA seq
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MKTRFFLASALLLAGCQITNTTNTVEEKTNTTNNDPAAQVAPTATTKTPTPEPQVVVPKK
IPTPQEQQDVWQRISMQLRADIPNDQRVIHYRDWYLRHPSHLNTVAQRAEPFLYMITEEI
EKRDLPLELALLPIVESSFDQFAYSHGRAAGLWQITAPTGRSFGLEQNWWYDGRRDVVES
TRAALDLLEYLNRKFDGNWLHALAAYNTGEGRVFRAIRNNKAAGKPTDFWSLDLPRETSD
YVPKLLAVSDVIQNRDKYGISIPAIDNKPAVKLVKPKTQMDLAMAAKFANVSLDEIQRLN
PGYNRWATAPDGPSHLLLPINKVDKFNAAFDENGRRGMKVIRYEVKPGDTLSVLARQHKT
TTKQIQRANNMSGTNIRVGRHILIPVAMQDGETVAARMANNTQQSHGSGYRTSYTVQSGD
SLWTIARQQKVTIDQITRWNGISKNAPLRVGQKLTLWKSSETGGVIRTVYYKVRSGDNLS
TIAQRYQVKVSDVVKWNQISGQKYLKPGQQLKLYVDVTKVSV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccgattttttttggcgagtgcgctacttctggctggttgccaaattacaaat
acgacaaatacagtagaagaaaaaacaaacacaaccaataacgatcctgcggcccaagtt
gctccgacggcaacaacaaaaacaccaacacctgagccgcaggttgttgttcctaaaaaa
attccaaccccacaggagcaacaagatgtgtggcaacgcatcagcatgcagctgagagcg
gacattcccaatgaccagcgcgtcattcactaccgtgactggtatctccgtcacccaagc
cacctcaacaccgttgcccagcgagccgaacctttcctctatatgatcaccgaggaaatc
gaaaaacgcgatttgccccttgagctcgcgctgctgccgattgtcgaaagctctttcgac
cagttcgcctattctcatggccgcgcggcagggctttggcagatcaccgccccaaccggc
cgcagcttcggccttgagcaaaactggtggtatgacggccgccgggatgtggtggaatcc
acccgtgccgcactggatctactcgaatatctcaaccgcaagtttgacggtaactggctg
catgcccttgccgcctacaacaccggagaaggccgggtgttccgagcgatccgcaataac
aaagccgccggcaaaccaactgatttctggtctctcgatctaccgcgcgaaaccagtgac
tatgtccctaagctacttgccgtctcggacgtgatccagaaccgcgacaagtacggtatc
agtatcccagcgatcgacaacaaacctgcggtaaaactggtcaagcctaaaacccagatg
gatttagcaatggcagccaaatttgccaatgtttcgctcgacgaaattcagcgcctgaac
cctggttacaaccgctgggcaacggcaccggatggcccgagccatctgctgctgccgatc
aacaaggtcgacaaattcaatgccgcctttgatgaaaatggccgccgtggcatgaaagtg
atccgctatgaggtcaagccaggcgataccctgagtgtactagcccgccagcataagacc
acgaccaagcagatccaacgtgccaacaatatgagcggcaccaatatccgcgtcggtcgc
catattctgatccctgtggcaatgcaagacggtgagacggttgcggctcgaatggccaac
aacactcagcaaagtcacggcagtggctaccgcacctcctatactgtccagtccggcgat
agcctttggactatagcccgccagcagaaagtcaccatcgaccaaatcactcggtggaac
gggatcagcaagaatgcccctcttcgtgttggccaaaagctgacactatggaaaagcagt
gaaacgggcggcgtgatccgcacggtttactacaaggttcgttctggcgacaacctaagc
actattgcccagcgctaccaggtcaaagtctccgatgtggtgaaatggaaccagatcagc
ggtcaaaagtacctcaagccaggacagcaattaaaactttatgttgatgttaccaaggta
agtgtatga
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