Photobacterium gaetbulicola: H744_2c1322
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Entry
H744_2c1322 CDS
T03698
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H744_2c1322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c1322
Enzymes [BR:
pgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H744_2c1322
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H744_2c1322
RecFOR pathway proteins
H744_2c1322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_22
Rad17
AAA_16
AAA_14
nSTAND3
AAA_18
TIP49
RNA_helicase
NTPase_1
AAA_2
Bac_DnaA
AAA_17
Sigma54_activ_2
NB-ARC
AAA_28
ABC_tran
AAA_24
bpMoxR
TsaE
DUF2170
NPHP3_N
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AJR08001
UniProt:
A0A0C5W8V9
LinkDB
All DBs
Position
2:1389317..1390333
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AA seq
338 aa
AA seq
DB search
MIEADRLVASDYPTTREEDIIDRAIRPKLLEDYKGQDHVRDQMEIFIKAAKLRDEALDHL
LIFGPPGLGKTTLANIVANEMGVSIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPQVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIT
QRLEYYKVEDLKGIVQRSANCLDLSMEEAGALEVAMRARGTPRIANRLLRRVRDFAEVKG
NGHICPDVAAKALDMLDVDSSGFDYMDRKLLMAIIDKFMGGPVGLDNLAAAIGEERDTIE
DVLEPYLIQQGFLQRTPRGRIATHRAYLHFGFDVPESK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcagacagactggtcgccagtgattacccgacaacgcgcgaagaggacatt
atcgatcgcgcaatccgccctaagctgctcgaagactacaagggccaggaccatgtccgg
gatcagatggagatcttcattaaagcggccaagctgcgagatgaagccttggatcacttg
ctgattttcggtccgccgggattggggaagaccaccctggctaacatcgttgccaacgag
atgggcgtgagcatccgcaccacgtcgggaccggtattggaaaaagccggtgatttggcg
gcgctgctgaccaacctggaagaaaatgatgtactgttcatcgatgagatccaccgtctt
agcccacaggtcgaggaggtgctgtatccggcgatggaggactaccagctggatatcatg
atcggagaaggcccggcagcacgctctatcaagattgacctgccgccttttaccctgatt
ggtgcgacgacccgggcaggttcgttgacctcaccgctgcgtgaccgttttggtattacc
caacgccttgaatactacaaggtggaagatcttaaggggattgtccagcgcagtgcaaac
tgtcttgacctctcaatggaagaagcgggggctttggaagtggcgatgcgcgcccgtggt
acaccgcgtattgccaaccgcctgctacgccgagtacgtgactttgccgaagtaaaaggc
aatggtcatatctgcccagatgtggcagccaaagccttggatatgctggatgtcgacagc
agtggttttgactatatggaccgcaaattgctgatggcaatcatcgacaagttcatgggc
gggccagttggcctcgataaccttgccgcggcaattggtgaagagcgcgacactatcgaa
gatgtgcttgagccataccttatccagcagggtttcctgcagcgtaccccgcgtggtcgt
attgccacccaccgcgcttacctgcattttgggtttgatgtgcctgagagtaaataa
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