Photobacterium gaetbulicola: H744_2c1393
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Entry
H744_2c1393 CDS
T03698
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H744_2c1393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c1393
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H744_2c1393
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H744_2c1393
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA
ABC_tran_CTD
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AJR08071
UniProt:
A0A0C5W922
LinkDB
All DBs
Position
2:1474406..1476445
Genome browser
AA seq
679 aa
AA seq
DB search
MMDKSSSKTFKLSSRYSPSGDQPTAINQLLEGLEAGLAHQTLLGATGTGKTFTVANVIAE
SDRPTLILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASV
NAHIEQMRLSATKALMERRDVVIVASVSAIYGLGDPDSYLKMMLHVRRGDILDQRDVLRR
LAELQYTRNDVAFERGNFRVRGEVIDIFPAESEKEAVRIELFDDEVDCISMFDPLTGAIL
QRDLPRCTIYPKTHYVTPRERVLEAIDGIKEELDVRKKQLLDNNKLVEEQRISQRTQFDI
EMMMELGFCSGIENYSRYLSGRAEGEPPPTLFDYLPPDGLLIIDESHVTVSQIGAMYRGD
RSRKENLVEYGFRLPSALDNRPLKFEEFESLAPQTLYISATPGQYEIDKSGGDIAEQVVR
PTGLLDPEIEVRPVATQVDDLLSEIRIREAKQERVLVTTLTKRMAEDLTEYLTEHGVRVR
YLHSDVDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERS
LIQTIGRAARHLEGKAILYADRITGSMERAMNETNRRRDKQIAHNEKHGIVPKALETKVS
DIMELGAPGKGSKANRAAQLHKVAEKKATYTTMSPQQLETEILQLEKEMYDAAQNLEFEK
AAELRDKIHTLREQFIANS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaagtctagttctaaaacctttaaactctcttctcgctattccccttccggt
gatcagccgacggctatcaaccagttgcttgaagggctggaagccggccttgctcatcag
accctgctgggggcgacggggacaggtaaaacttttacggtggccaatgtgattgccgag
tcagatagaccaacgctgattctggcaccgaacaaaaccttggcagcacaattgtacggt
gagatgaaagagttcttcccggacaatgcggttgagtattttgtttcctactacgattac
taccagccggaagcttacgtcccgacgacagatacctttatcgaaaaagatgcgtcagtc
aatgcgcatatcgaacagatgaggctgtctgccaccaaagcgctgatggagcgccgtgat
gtggtcattgtggcatcggtgtcggcgatttatggtctgggcgatcctgactcatacctc
aaaatgatgctgcacgtgcgccgtggcgacatcttggatcagcgcgatgtcttgcgccgc
ttggctgagttgcaatatacccgaaacgatgtcgccttcgagaggggtaacttccgggta
cggggagaggtgatcgacatcttcccggctgaatctgagaaagaggcggtaaggatcgag
ctgtttgacgatgaagttgattgcatcagcatgtttgatccgctaacaggtgccatattg
caacgggatctgcctcgctgcacgatctaccctaaaactcactatgttaccccacgggag
cgtgtccttgaggctatcgatggcatcaaggaggagctcgatgtacgcaaaaagcaactg
ctcgacaacaacaagctggtcgaggagcagcgtattagccagcgaactcagttcgatatc
gaaatgatgatggagcttggcttctgctcggggatcgaaaactactcccgctacctcagt
ggccgtgccgaaggtgagccgccaccgaccctgtttgactacttgccgccggatggcttg
ttgatcatcgatgagtcccatgtcaccgtctcgcaaattggtgcgatgtaccgcggtgac
cgctctcgcaaagaaaacttggtggaatatggttttcgtctgccgtcggcactggataac
aggcctctgaaattcgaggagtttgagtctctggctccccagacgttgtatatctcggca
acaccgggccagtatgaaatcgacaaatccggcggggatattgccgagcaggttgttagg
ccaacagggttgctcgatccggagattgaagtccgcccggttgcgactcaggttgacgac
ctgctgtctgaaattcggatccgcgaggccaagcaggagcgggtactggtaaccacgttg
accaaacggatggcagaggatctcactgaatacctgactgagcacggggtcagggtgcgc
tacctgcattcggatgtcgacacggttgagcgggttgagatcattcgcgatctgcggctg
ggggaattcgatgtcctggtcgggatcaacttgctgcgtgagggcttggatatgccggag
gtctcgctggtggcgatcctcgatgccgataaggagggctttttgcgctccgagcgttcg
ctgatccagacaatcggccgtgccgcccgtcacttggaaggcaaggcgatattgtatgcc
gacaggatcaccggctcgatggagcgggcgatgaatgaaaccaaccgacgccgtgataag
cagatcgcccataatgaaaagcatggcattgtgcccaaggcactcgaaaccaaagtgtcc
gacattatggaattgggggccccgggcaagggcagcaaagccaaccgcgcagcacagctg
cataaagttgccgagaagaaggcaacctataccacgatgtctccgcagcagctggaaacg
gaaattctgcagcttgagaaggaaatgtatgatgctgcccagaacttggagtttgaaaaa
gcggctgagctcagggacaaaatccacacattgagagagcaatttattgccaatagctag
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