Photobacterium gaetbulicola: H744_2c2201
Help
Entry
H744_2c2201 CDS
T03698
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H744_2c2201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgb03019
]
H744_2c2201
Enzymes [BR:
pgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H744_2c2201
Messenger RNA biogenesis [BR:
pgb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H744_2c2201
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Helicase_C_2
SPECT1
AAA_22
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AJR08864
UniProt:
A0A0C5WUW8
LinkDB
All DBs
Position
2:complement(2432529..2433779)
Genome browser
AA seq
416 aa
AA seq
DB search
MSFQSLGLNSQLVENVSSLGFEQPTPVQQQAIPEILAGHDVLAGAQTGTGKTAAFGLPLL
HRLLEGNGTVTEAKQVKALILTPTRELAQQVFDSLSGYAKDTELKVAVAYGGTSMKVQVK
ALESGVDVLVATPGRLLDHAHVRTVDLSKISYLVLDEADRMLDMGFIDDIKRILKRMHVE
RQTAFFSATFGKQVKKLAYDILDDPKLIEVTPSNSTAVTVEQMVYPVDKHRKSELLAYLI
GSKNWQQVLVFTKTKQGSDELAKELGKDGIKAVSINGDKSQGARQRALDDFKSGKARVLV
ATDVAARGLDIEQLEYVVNYEMPFKAEDYVHRIGRTGRAGQAGHAISLMSLDEEWALRAI
EELLDKRLPQQWLEGYEPDPTIEPPENRRRGRSSDKRRAKAKSQIHKNRGRYRSRK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccaatcgctggggctaaatagccaacttgttgaaaatgtttcttctctcggt
ttcgagcagccaacaccggtgcagcagcaggctattcctgaaatattagcaggccatgat
gttttggccggtgcccagaccggtacgggaaagacagccgcgtttggtttgcctctgctg
catcgtctattggaaggcaatggcactgtgacggaagcaaaacaggtcaaagccttgatc
ctgacaccgacccgcgagctggcccagcaagtgttcgatagcttgagcgggtatgcgaaa
gataccgaactgaaagttgcagtggcctacggtggcacgagtatgaaggtgcaggtaaag
gcactcgagtcaggcgtggatgtgctggttgccacgccaggccgtctgcttgatcatgcg
catgtgcgtacggttgatcttagcaagatcagttacttggtattggatgaagccgaccgt
atgttggatatgggttttattgatgacatcaagcgtattctcaagcgcatgcatgttgag
cgccagactgctttcttttcggcgacttttggcaagcaggtcaagaagctcgcgtatgat
attttggatgatcctaagctgatcgaagtgacgccaagcaacagcacggctgtcacggtg
gagcagatggtgtacccagttgataagcatcgtaagagtgagttgctggcgtatttaatc
ggttcgaaaaattggcagcaggttctggtgtttaccaaaaccaaacaagggtcggatgaa
cttgccaaagagcttggcaaggatgggatcaaggcggtctctatcaatggggataaaagc
caaggtgcgcgccagcgtgcactcgatgatttcaagtcgggcaaggcaagggtcttggtt
gccactgatgtggctgcgcgagggctggatatcgaacagttggaatatgttgttaactac
gagatgccatttaaagctgaagattatgtccaccgtattggtcgcactggtcgagcgggt
caggctggccatgctatttcattgatgagcctggatgaagagtgggcattgcgggcaatt
gaggaattgctggataaacgtttaccgcagcagtggctcgaaggttatgaaccggatccg
acgattgaaccaccagaaaaccgtcgacgtggacgctctagtgataaacgacgtgctaaa
gcaaaatcgcaaatacacaaaaatagaggccgttatcgttcgcgtaagtag
DBGET
integrated database retrieval system
