Photobacterium gaetbulicola: H744_2c2677
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Entry
H744_2c2677 CDS
T03698
Name
(GenBank) putative integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgb03032
]
H744_2c2677
03036 Chromosome and associated proteins [BR:
pgb03036
]
H744_2c2677
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c2677
DNA replication proteins [BR:
pgb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H744_2c2677
Chromosome and associated proteins [BR:
pgb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
H744_2c2677
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
H744_2c2677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HAAS
HU-DNA_bdg
Coagulin
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AJR09333
UniProt:
A0A0C5WQC7
LinkDB
All DBs
Position
2:complement(3005787..3006077)
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AA seq
96 aa
AA seq
DB search
MTKSELIERLCSQQTHLSAKQVEDAIKEILEHMATTLAEGDRIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRVNQSIAS
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtctgaattaattgaaagactgtgtagtcaacaaacacatctttctgccaaa
caggtagaagatgctattaaggaaatccttgagcatatggctacgaccctggctgagggt
gaccgaatcgaaatccgtggctttggtagcttctctttgcattaccgcgctccacgtgta
ggtcgaaacccgaaaacaggtgacaaggttgagttggacggcaagtacgttcctcacttc
aagcctggcaaggaattgcgcgaccgtgttaaccagtctattgctagttaa
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