Photobacterium gaetbulicola: H744_2c2703
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Entry
H744_2c2703 CDS
T03698
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgb03032
]
H744_2c2703
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c2703
Enzymes [BR:
pgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H744_2c2703
DNA replication proteins [BR:
pgb03032
]
Prokaryotic type
DNA Topoisomerases
H744_2c2703
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H744_2c2703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF4795
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AJR09359
UniProt:
A0A0C5WWF9
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Position
2:complement(3037898..3040543)
Genome browser
AA seq
881 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHVRDLPTGARSTGKKAAATSTKGLSAEE
KARIKKEKERKALINKMGVDPYHDWEAQYEVLPGKEKVVNELQKLAADADYVYLATDLDR
EGEAIAWHLREIIGGDDERYKRVVFNEITKNAIQQAFEQPGELNMDGVNAQQARRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLIVEREREIKAFDPEEYWDMHANTQTAGSDAL
RLMVAQQAGKTFRPENEADTMAAKALLEKAAFQVKDREDRPTSSKPSAPYITSTLQQAAS
TRLGYGVKRTMGLAQRLYEAGYITYMRTDSTNLSKEAVEAAREFIASEYGDNYLPSSPNV
YGSKGNAQEAHEAIRPSSVDVKAENLEGMEQDAIKLYDLIWRQFVSCQMVPAKYDSTTIT
VEAGDFTLKAKGRTLRFAGWTKVQRPSGKNEDTTLPMVHVGDTLKLESLEPKQHFTKPPA
RFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVRVDQRRFYAEKMGEIVSDRLDESFA
DLMDYDFTARMEGNLDKIAEGEASWKSVLDKFFSDFTTELEKAELDEAEGGMKPNNIVLT
DIKCPTCERPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEDGIVNVLEEDVETAAL
RAKKRCPKCSTAMDAYLIDAERKLHVCGNNPSCDGYVVEKGEFKLKGYDGPVIECDKCGS
DMELKNGRFGKYMGCTNETCKNTRKILKNGEIAPPKEDPVHLPELPCSQDPDAYFVLRDG
ASGLFMAASTFPKSRETRAPLVEELVRFKDRLSPKFLYLTEAPTEDPDGRPTVVRFSRKT
KENYIRSEIDGKPSGWTGLYIDGKWEITDKRKKPKKEKAED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatctctcgttattgtggagtccccagccaaggcgaagacaatcaataagtac
ttgggtaaggacttcgttgttaagtcaagcgtcggtcacgttcgtgatttgccgaccggt
gcacgtagcactggaaaaaaagcggcggctacttcaaccaagggcttgagcgcagaagaa
aaagcgcgcattaaaaaagaaaaagaacgaaaagcgctaatcaataaaatgggcgttgac
ccttaccatgactgggaagcccaatatgaggtgcttcctggcaaggagaaagtggtcaat
gaactacagaagctagcggcagatgctgactatgtttatctcgcaaccgatttggaccgc
gaaggggaggctattgcgtggcaccttcgtgagatcatcggcggcgatgatgagcgctac
aagcgagtggttttcaacgagatcaccaaaaatgctatccagcaggctttcgagcagccg
ggagagctgaacatggatggcgtgaatgcgcagcaggcacgccgcttcctcgaccgcgtg
gtcggctttatggtttcccctctgttgtggaaaaaggtcgcgcgtggtctttctgcgggc
cgtgtacagtcggtcgcggttaagctgattgttgagcgtgaacgcgaaatcaaggcgttt
gacccagaagagtactgggacatgcatgccaacacccagaccgccggcagcgatgcccta
cgtttgatggtggcccagcaggcgggcaagacgttccgtccggaaaacgaagctgacacc
atggcggcaaaagccctgttggaaaaggcggccttccaggtcaaagaccgtgaagaccga
ccaaccagcagtaagccgtcagcaccttacatcacttcgacgctgcaacaggcggcgagt
actcgtttaggctatggcgttaaacgcaccatgggcttggcccagcgcctctatgaggcc
ggttacattacctatatgcgtaccgactcgaccaacctgtcgaaggaagccgttgaagcg
gcgcgagagtttattgctagcgagtatggtgataactacctaccgtcctcgccgaacgta
tacggtagcaagggcaatgcccaggaagcgcacgaagcgatccgtccatcaagcgttgac
gtgaaagcggaaaacctcgagggcatggagcaggatgccatcaagttgtacgacttgatc
tggcgtcagttcgtttcttgtcagatggtaccggcgaaatacgattccaccacgattacg
gtggaagccggcgactttaccctgaaggcgaaaggtcgcaccctgcgttttgccggttgg
actaaagttcagcgtccgtcgggtaagaatgaagatactacgttgcctatggttcatgtg
ggcgacacgctcaagctggaatcgctggagccgaagcagcacttcaccaagccaccagca
cgctttaccgaagccgcgctggttaaagagctggaaaaacgaggcatcggccgaccttca
acctacgcgtccattatctcgacgattcaggaccgaggctatgtgcgtgttgaccagcgt
cgtttctacgccgagaagatgggtgagattgtctcggatcgtcttgacgagagcttcgca
gacctgatggactacgactttaccgcccggatggaaggcaacctcgataaaatcgccgag
ggtgaagcgagctggaagtcggtgctggacaagtttttcagcgacttcaccaccgagctg
gaaaaagccgagctggacgaggctgaaggtggcatgaagccgaacaacattgtgttgacc
gatatcaagtgcccgacttgtgagcgcccgatggggatccgtaccgcttcgaccggtgtg
ttccttggctgttccggctatgccttaccgccgaaggagcgttgcaagacgaccatcaac
ctaggtgacgaggacggtatcgtcaatgtgttggaggaagacgttgaaacggccgccctg
cgtgccaagaagcgttgtccgaaatgtagcacggcgatggacgcgtacctgatcgatgcc
gagcgtaagctgcacgtgtgtggtaacaacccgagctgtgatggctacgtggttgagaaa
ggcgagttcaagctcaagggctacgatggcccggttatcgagtgtgacaagtgtggctcg
gacatggagctcaagaacggtcgcttcggtaagtacatgggttgtaccaacgagacctgt
aagaatacccgtaagatcttgaagaacggtgaaatcgcaccgccgaaggaagatccggtt
catctgcctgagttgccatgtagccaggatcctgatgcttacttcgtattgcgagatggc
gcttccggcttgttcatggcggccagtaccttccctaaatcgcgtgagacccgtgcgccg
ctggtagaggagctggttcgtttcaaagaccgcctgtcaccgaagttcctgtatttgacc
gaggcgccaacagaagatccggatggccgcccgaccgtggttcgctttagccgcaagacc
aaagagaactacatccgctcggaaattgatggtaaaccatctggctggacggggctgtac
attgacggtaagtgggaaattaccgataagcgcaagaagccgaagaaagaaaaagctgag
gattaa
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