Photobacterium gaetbulicola: H744_2c3103
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Entry
H744_2c3103 CDS
T03698
Name
(GenBank) putative exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c3103
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H744_2c3103
Archaeal homologous recombinant proteins
H744_2c3103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
DUF6824
MeaB
DUF87
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJR09754
UniProt:
A0A0C5WXP3
LinkDB
All DBs
Position
2:complement(3486310..3490095)
Genome browser
AA seq
1261 aa
AA seq
DB search
MKILALRGENLASLQQPFEIDFAGGRLGDAGLFAITGKTGAGKSTLLDAICLALYDRIPR
LQSNKKNDAEIGRDGDNGRIKANDVRSILSRGKAEGYAEVDFVANDGSHWRAHWHVRRAR
GRADGRIQASEQWLESLETGQRFAGKKAELQAEVERLVGLSFEQFRRAVMLPQGEFAAFL
KAGADERAALLERMTGGEIYGRLSMAAYERARDEKQKLDALQAQLGDIELLDDEQKAQLT
GQLAVLKQQLEQWEQSINALAQHHQALQVQARLHLQQQEAEQALVKAEEQLKEAAPRQEQ
LKQIAKVQPARSDFSLLQQTQLQLSKLQASLARATEELAQHKQGLLGADRRVQSTKQALA
TAKQHWDDLAPKLKQVALLDEQLAAGQRQLAELDTDHQQQLKLFNEHQQATEQKKRQRQQ
LQQRHHQLAMVLEQNRELAGVAEQYQPVLDNLDQYLSAHRTLATLSREKQQLQFEQQSHD
RNAAMLEAQQKEVAGQLDAVNKVLEELKVEQQEQAIADSQKQFASKQAELDVLRQAMSGT
KEWSTLLEQVEKLKAEHQELNQLKQQTEARLEALVPDMDQLFARYQEAEQQLQQSMAVVN
LNEYRSHLKPDSPCPLCGSLEHPYAEQHPVVEGLLHSQQQRLRELQQQLQNGEGERRHLQ
QQLPQCQQRLAVIDNELARYRAYSDQIVNQLLAMLEQAELSTSLTAEAGSDHLHNQLVQW
QQQAEQAYAEIRALQQGMETAQQQLQQGRQLQFQRQQLQQAEAEIKEHVHQQSQAETQRT
ERLQSIEQQSQTQQDILSSRGEALNEQYGNDQWLDMLRQHGAEQYIQQLKQQVEQYLSSH
KAQQEVERELHELAPQLAELEASMAASYKQALEKQQKAEQLQQQVQSLWQQRVGLFGEQA
ADAIEQQAQMALSEAQQQHEQAEQAQRQAGETMAAATAALAGLQQQEKELSAEHRQIVHN
WLGWQDKLALNEHQLMQLLSKDEAWQSQEQAALKALDDARTEAATRVQERAAAIAQHQAA
AEQAEQWFAGHQIDPAALSVDEDPVRQLREQWSAEKQSCDEQIFQLRQRLAMAEQALQQA
GELTEKMAAQQKQTELWLQMSELIGSATGNKFRTLAQGLTLQQLVMLANQHLHDLAPRYA
LQPVPNSPLALQVVDHDMGDEVRSVESLSGGESFLVSLALALALASLAADTRQLGSLFID
EGFGTLDPDSLEMALACLDALQADGRQIGVISHVGTLVERIGVQVAVEAQGGGRSQIKVR
G
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttagcgctacgtggtgaaaacttggccagcctacagcagccatttgagatt
gattttgccggcggccgcctgggcgacgcgggcttgtttgccattaccggcaaaaccggg
gccggtaaatcgaccttgcttgatgcgatctgccttgctttgtatgaccgcatcccccgt
ttgcagtcgaacaagaaaaatgacgcggaaatcggccgcgatggcgacaatggccggatc
aaggccaacgatgtccgcagtatcttgtcccgcggcaaagccgaaggttatgccgaggtt
gattttgtggccaatgacggcagtcattggcgggcccactggcatgtccgccgggcgcgc
ggccgggccgatggccgtatccaagcctcggagcagtggctggaaagcctcgagaccggc
cagcgctttgctggtaagaaagccgagttgcaggcggaagtcgaacgtttggtcggtctg
tcttttgagcagttccgccgggcggtgatgctgccccagggcgagtttgccgcattcctc
aaagcgggggcggatgagcgcgcggccttgctggagcgaatgaccggcggtgagatctac
ggccgactgtcgatggcggcttacgagcgggcacgggacgaaaagcagaaactcgacgcc
ctgcaggcccagcttggtgatattgagctgcttgatgatgagcaaaaagcgcaattgacc
gggcagttggcggtgctcaagcagcagctggagcagtgggagcagtcaatcaatgcgttg
gcccagcatcaccaggcgctgcaagtccaagcaagactgcatctgcagcagcaggaagcc
gagcaggcgttggttaaagccgaggagcaacttaaagaggccgctcctcgtcaggagcag
ctgaaacaaattgccaaagtccaacctgcccgcagtgacttctccctgttgcagcaaacc
cagctgcagctgagcaagttgcaggcatcgctcgccagggcgacagaggagctggctcag
cacaagcaaggcttgttaggggcggaccgccgcgtacagagcaccaaacaggcactggcg
acagccaagcagcactgggatgatttggcgccgaaactcaagcaggtcgcgttgctcgat
gagcagctagcggccgggcagcgtcagctggccgagctggataccgatcaccaacagcag
ctcaagctgtttaatgaacatcagcaggccacagagcagaagaaacgccagcgccagcag
ttgcagcaacgccatcaccagttggcgatggtgcttgagcaaaaccgcgagctggccggc
gttgctgagcagtatcagccggtactggacaacctggatcagtacttgtccgctcaccgg
acactggcgacattgtcgcgagaaaagcagcaactgcagttcgagcagcaatcccatgac
cgcaatgcggctatgctggaggcccagcaaaaagaagtggcaggccaacttgacgcggtc
aacaaggtgctggaggagctcaaggtcgagcagcaagagcaggcgattgccgatagtcag
aaacaatttgccagcaaacaggccgaactcgatgtcctgcgtcaggcgatgtcggggacc
aaagagtggtcgactctgctcgagcaggtggaaaaactcaaggccgagcatcaagagctg
aaccagctcaagcagcagaccgaagcccgcctcgaggcgctggtaccggacatggatcag
ctctttgcccgttatcaagaggctgagcagcaactgcagcaaagcatggcggtggtgaac
ctgaatgagtaccgcagccatttgaagccagactctccttgcccattgtgcggctctctc
gaacacccttatgccgagcagcatcctgttgtggaaggcttgctgcacagccagcagcag
cgcttgcgtgagttgcagcagcaactgcaaaacggcgagggtgagcgccgccacttacag
cagcagttgccgcaatgccagcaacggctggcagtgattgataatgagctggctcgttac
cgggcctacagcgatcagattgtcaaccagttgctggcgatgcttgagcaggccgagttg
tcgacctcgcttaccgccgaggctggcagtgaccacctccataaccagctggttcaatgg
caacagcaggcggagcaggcatatgccgagatccgggccttgcagcagggaatggaaact
gcccagcagcagctgcagcagggacgtcagttgcagttccagcgtcagcagctgcaacag
gcggaagccgaaattaaagaacatgtgcaccagcagtcgcaggcggaaactcagcgcacc
gaacggctgcagtcgattgagcagcagagccagacccagcaggatatcctgtcttcgcgt
ggcgaagccctgaatgagcaatacggtaacgatcagtggcttgatatgctgcgccagcac
ggtgccgaacagtatatccagcagctcaagcagcaggtggagcagtacctgtctagccat
aaggcgcagcaagaggtggagcgagagctgcatgagctggccccgcagcttgccgagctg
gaagcgagtatggcggcgagctacaaacaggcactcgaaaagcagcaaaaagccgagcag
ttgcagcagcaggttcagtctttatggcagcagcgtgtcggcttgttcggcgaacaggca
gccgatgcgattgagcagcaagcacaaatggccttgtctgaagctcagcaacagcatgag
caagccgagcaggcacagcgccaggctggggaaaccatggcggcagcgacggctgccctg
gcaggcctgcagcagcaagaaaaggagctgtcggcggagcatcgccagattgtccataac
tggctgggctggcaggacaagttggcgctcaatgagcatcagctgatgcagttgctcagt
aaggacgaagcctggcagtcccaagagcaggcggcactcaaggcccttgatgatgcccgt
accgaggcagccacccgggtgcaggagcgtgctgctgcgattgcccagcaccaagcggcg
gctgagcaggccgagcagtggtttgccggtcaccaaatcgatccggcagcgttatctgtc
gatgaggatcctgtgcgccagctgcgcgagcagtggagcgcggaaaaacagtcttgcgat
gaacagatcttccagttacgccagcgcttggcgatggccgaacaagccttgcagcaggct
ggtgagctgaccgaaaaaatggccgcgcagcaaaagcaaaccgagctgtggctgcaaatg
agcgagctgattgggtcggcaacgggcaacaagttccgtacattggcccagggcttgacc
ctgcagcagctggtgatgctggccaatcagcacttgcacgatctggcgccacgctacgcc
ttgcagcccgtgccgaacagtccgttggccttgcaggtcgtcgaccatgacatgggcgat
gaagtgcgcagtgtcgagtcgttatccggtggtgaaagcttcctggtgtcgctggcattg
gcgttggcgctggcctctctggctgccgatacccgtcagctcgggtcgctgttcatcgat
gaggggtttggcacgcttgatcccgacagcctggaaatggcgttggcctgccttgatgcc
ttgcaggccgatggccgacagatcggggtaatttcccatgtcggtaccttggtggaaagg
atcggtgtacaggttgccgtcgaggcacagggaggcggccggagccagatcaaggtaagg
ggctaa
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