Photobacterium gaetbulicola: H744_2c3235
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Entry
H744_2c3235 CDS
T03698
Name
(GenBank) endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pgb
Photobacterium gaetbulicola
Pathway
pgb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H744_2c3235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c3235
Enzymes [BR:
pgb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
H744_2c3235
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H744_2c3235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AJR09877
UniProt:
A0A0C5WU03
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All DBs
Position
2:complement(3648374..3649225)
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AA seq
283 aa
AA seq
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MKLIGAHVSAAGGVHNSPDNANKIGANAFALFTKNQRQWVAKPLEQDVIKAFKARCQQYG
FTPDAILPHDSYLINLGAPEREKLEKSRTAFIDEMARCEQLGLHLLNFHPGSHLKKISES
ECLALIAESINLAHAAVPNVVAVIENTAGQGSNLGWRFEQLASIIEQVEDKSRVGVCIDT
CHAFAAGYDLRSETATDKTFAEFDLVVGMQYLRGMHLNDSKGGLGSHLDRHHSLGEGEIG
WDCFRYVMQDSRFDNIPLVLETINPDIWRQEIATLRSFIPETV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatcggtgcgcacgtatccgctgctggcggtgtgcacaactcgccagacaat
gccaacaagatcggtgctaatgcctttgccttgttcaccaagaaccagcgccaatgggtg
gctaagccactagagcaagatgtgatcaaggcattcaaggcccgctgccaacagtatggc
tttacccccgatgcgattcttccccatgattcatacctgataaacctcggggcgccagag
cgcgagaagctggaaaagtcgcgtactgcctttattgacgagatggctcgctgtgagcag
ttgggattgcacctgctgaacttccatccgggcagccatttgaagaaaatctccgaaagc
gaatgcctggctctgattgccgagtcaatcaatttagcccacgccgccgtgccgaatgtg
gtggcggtgatcgagaatacggccggacagggcagcaaccttggttggcgtttcgagcag
ctcgccagtattatcgaacaggtcgaggacaaatcgcgggttggcgtctgtatcgatacc
tgccatgcgttcgctgccggctatgatttgcgcagcgagacggcaacagacaagaccttt
gccgagtttgacctcgttgtcgggatgcagtacctgcgtgggatgcacctcaatgactcg
aaaggcggcctgggcagccacctcgaccgccaccacagcttaggggaaggggaaatcggc
tgggattgcttccgttatgtgatgcaagatagccgctttgacaatatcccactggtactg
gagaccattaaccccgatatctggcggcaggaaattgctaccctgcgttcgtttatccct
gagacggtatag
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