KEGG   Pseudomyrmex gracilis (graceful twig ant): 109851614
Entry
109851614         CDS       T05003                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04512  ECM-receptor interaction
pgc04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109851614
   04518 Integrin signaling
    109851614
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pgc00536]
    109851614
Glycosaminoglycan binding proteins [BR:pgc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109851614
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 109851614
NCBI-ProteinID: XP_020277435
LinkDB
Position
Unknown
AA seq 1502 aa
MKRRALIAILLVTQVLLLLDQVSAVRNRPRKQRSRLEDQTHQAGNEYDYEYNYENYDEYD
EKNETTTPSSSVTQSSTRHPGWSELPIESTASSYKPEASTDSVLTTRSYDNLVPQTNVTS
IPEALSTEILPGESNLYGSIAFPGLRGEPGRPGDIGRPGDSGFPGQPGTPGIPGPPGPPG
PVPDVSMYYQQLALSQANQDKGPTGAAAPLYGPEAFAYMNAQIGPTGPRGPPGPPGPSGP
QGFQGARGEPGEPGSPGPPGEQGPRGLAGLPGKDGTAGEDGETGAPGSPGPAGQRGPPGM
PGLPGMKGHRGYPGLDGAKGEQGTSGEKGSTGAPGPMGQMGSIGPAGPRGERGREGPPGP
SGLRGLDGIAGSPGQPGVAGKPGAPGFPGTPGSKGDQGVQGPPGSQGLQGPRGESGRPGQ
PGETGPQGPQGKDGAPGEKGAIGLPGLVGTPGFPGARGQPGVPGNPGIPGVKGAPGLPGE
RGSKGDSGVKGDAGMPGPRGVPGPPGNEGKRGKRGIRGPPGATGSPGERGPSGVRGLPGA
DGPIGPQGPPGDRGSPGAVGPKGATGDLGRPGSPGLQGIRGSTGRPGAPGKPGNPGERGI
PGADGKPGEQGPPGVQGLPGPLGQPGERGPPGEFGKDGEPGNPGPHGPRGDTGKEGSPGI
QGPPGPPGNNGERGPPGPAGIRGFQGLPGTAGNPGIPGKDGEPGVQGSPGPPGPVGNRGE
RGFPGERGLMGSPGPVGPRGESGAQGADGLIGLPGSKGDKGNSGSPGLLGLPGARGLPGE
PGSKGDRGAPGPVGPEGPIGHVGDRGPQGEVGPSGPPGEPAERGDPGLPGPAGEPGAPGN
SGERGVQGIQGLQGFPGLQGLIGLPGLKGDRGYPGLKGEQGSPGFPGIRGEVGLPGPVGL
TGAKGTRGEPGARGEPGLMGPPGIAGHVGPSGPPGNAGPPGASGLPGIKGSTGDTGRPGN
PGAIGNPGFPGIDGNKGETGSPGPQGPTGPQGTPGPSGERGLPGLPGSPGPVGSRGLRGA
PGETGQPGKPGAEGPPGPPGLLGPHGPPGPIGEMGPEGSVGKPGPPGIAGRPGDKGPPGA
PGATGLPGPSGLQGPPGPTGPTGPTGERGLKGETGPQGVEGPQGPRGKPGLPGVEGGKGD
KGQEGQQGAKGHRGFTGLQGLPGSPGLPGEKGIPGPQGPPGKDGEPGIRGNPGRDGNPGP
IGPAGNPGSRGPPGEEGRHGSPGLPGPPGPPGPPGDVGFAYDAASLAALMGQGQTKGPDP
LGDEPPRIFSKDITEEERRELLTKAYENLKLSFQKLIKPDGEKNSPAKTCRDLFVAYPDK
SSGQYWIDPNEGDIRDAILVYCDAEKRATCILPNPSRSPEITHITEQQETWLSEIHGGMK
ITYKADSNQISFLQLLSKSAQQNITYYCKNSVAYFDYDRKTYRRGLKFLAWNDAELTPRG
NQRFQYEMIVDGCSHHQSQWDKTILLYETDKPTRLPILDVALRDIGTSEQSFSVEIGAAC
YQ
NT seq 4509 nt   +upstreamnt  +downstreamnt
atgaaacgacgggcgctgatcgcgatacttctcgtaacccaagtgctactgctgctggat
caggtgagcgccgtgagaaatcgaccgaggaagcaacgatccagactcgaagaccagacg
caccaagctggcaacgaatacgattatgaatacaactacgagaattatgacgagtacgat
gaaaagaatgagacgacaacgccgtcatcgtctgttacacagtcaagcacacgacacccg
ggatggtcggaattaccaatagaaagtacagcatcctcgtacaaaccggaagcatctaca
gactcagttctcacgactcgatcttatgataatttggttccacaaactaatgtcacatct
ataccggaagcattatctaccgaaattttgccaggtgaaagtaatctatacggttctata
gcttttcctggtctacgaggagaacctggtcgacctggagatattggccgcccgggtgac
tcaggatttcccggacaacctggaactcctggaattccaggaccacctgggcctccagga
ccagtacctgatgtatctatgtattatcaacaattagctttgtctcaagcaaatcaagat
aaaggaccgacaggtgcagctgcgccactgtatggaccggaagcatttgcttatatgaat
gctcagataggtccaacgggtccgcgaggtcctccgggtccacctggaccttctggtcct
cagggttttcaaggtgcacgcggtgaacctggcgaaccgggatctccaggcccacctggc
gaacaaggtccaagaggtttagcaggactgccaggaaaagatggcaccgctggagaagat
ggtgaaaccggtgctccgggatcaccaggacccgcgggacaacgtggtcctccaggaatg
cctggacttccagggatgaaaggccatcgtggttatccaggtcttgatggagcaaaaggt
gaacaaggaacttctggggagaaaggatctacaggcgcaccagggccaatgggtcaaatg
ggatcaataggtccagcaggaccgcgcggtgaaagaggaagagaaggtccaccgggacct
tctggattgagaggtctcgacggaattgccggatcgcctgggcaacccggtgttgcgggc
aaacctggcgcaccaggttttccaggtactccgggatctaaaggcgatcaaggagtgcaa
ggaccaccaggaagtcagggattgcaaggaccgcgaggtgaaagtggccgtccaggacaa
cctggtgaaacaggtccgcagggtcctcaagggaaagacggagctcctggtgaaaaagga
gctatcggtttgccaggattagtcggtacgcccggatttccaggtgctcgaggtcaacct
ggcgtaccaggcaatcctggtattcctggggtcaaaggagcacccggtcttcctggtgag
aggggttctaaaggtgattccggtgtaaagggagatgcaggaatgcctggtccacgtgga
gttccaggacctcctggtaacgaaggcaaaagaggcaaaagagggatacgcgggccacca
ggcgctacaggatcacctggtgaacgcggcccatctggagtgcgaggtcttcctggagca
gatggtcctatcggaccgcagggaccacccggcgatcgtggttctcccggagctgttggg
ccaaagggtgctactggagatcttggacgacctggatcaccaggattacaaggtatacgt
ggttcaacaggtaggcccggagctcctggaaaaccgggcaatcctggcgaacgtggaatt
cctggtgcagatggtaagcctggagaacaaggtccgcctggagtacagggtttgccggga
ccactaggacaaccaggagaaagaggccctcccggagaatttggaaaagatggtgaacct
ggaaatccaggacctcatggtccaagaggagatactggtaaggaaggatctccgggaata
caaggtccaccgggacctccgggcaacaatggcgaacgaggtcctccaggtcctgctgga
atcagaggttttcaaggtcttccaggcaccgctggtaatccaggtattccaggcaaggat
ggagaacctggagtgcaaggatctcctggcccaccgggaccagttggcaacagaggcgag
cgagggtttccaggagagagaggacttatgggatctccaggacctgtgggtccgagagga
gaatctggagcgcagggagctgatggtcttattggtttaccaggatctaaaggagacaaa
ggaaattcaggttcaccgggattattaggacttccaggtgcgagaggattacctggagaa
ccaggatcaaaaggagacaggggtgcgcctggaccagttggtcctgaaggtccaatagga
cacgtcggagatcgcggtccacaaggagaagttggaccttctggtcctcctggagaacca
gcggaacgaggtgatcctggtttacccggacctgctggcgagcctggagctcccggcaat
tcaggagagagaggtgttcaagggatccagggattgcagggttttccagggctacaaggg
ttaattggccttcctggactaaaaggcgatcgcggatatccgggtttaaaaggagaacaa
ggaagtccgggatttcctggcattcgtggcgaagttgggttaccaggtcctgtcggactt
actggtgctaaaggaacacggggcgaaccgggtgcgcgaggtgaacctggcttaatggga
ccgccgggtattgcaggacacgtcggcccatcgggcccgccaggaaatgcgggaccaccc
ggcgcttcaggattgcctggtattaagggcagtacaggtgataccgggcgtcctggaaat
ccaggtgcaattggtaatcccggtttccctggaatagacggaaataaaggcgaaaccgga
tctccaggtcctcaaggaccgactggtcctcaaggaactccagggccgtctggcgaaaga
ggcttgccaggtttgcctggttctcctggtcctgtaggaagtagaggattacgcggagca
cccggtgaaacaggacaacctggaaaaccgggagcagaaggtccgcctggacctcctggg
ttattaggtcctcatggtcctcctggtcctataggagaaatgggaccagaaggatcagtt
ggaaaaccaggaccacctggaatagcaggacgacctggagacaagggaccacctggagca
cctggtgcaacaggcctgcccggtccttctggattgcaaggaccacctggacctacagga
ccaactggtcctactggagaacgtggtttaaaaggcgaaacgggaccacagggtgtcgaa
ggtccacaggggccacgtggaaaacctggtctgccgggtgttgaaggcggaaaaggggat
aagggacaggaaggacaacaaggagctaaaggacatcgaggatttaccggtttacaagga
ttacctggatctcctggtttaccgggagaaaaaggtatacctggtcctcaaggacctcct
ggcaaagacggagaaccaggtatcagaggtaatcctggacgtgacggaaatccaggacct
atagggcctgcaggaaatcccggatcgagaggtccacctggagaagaaggccgccacgga
tcgccaggtcttccaggacctccaggaccacccggtcctcctggagatgttggttttgct
tacgatgctgcgtctttagcagcacttatgggacaaggtcaaactaaaggaccagatcca
ctcggagacgaacccccgagaatatttagcaaagatatcactgaagaggaacgaagagaa
ttgcttacaaaagcatatgaaaatcttaaattatctttccaaaaattgataaaacccgat
ggtgaaaaaaattcaccagccaaaacctgtcgagatctatttgttgcctatccagataaa
tcatctgggcaatattggattgatccaaacgaaggagacattcgggacgcaattttggta
tattgcgatgctgaaaaacgtgcaacatgtattttgccgaatccttcgcgttcgccggag
atcactcatataaccgagcaacaagaaacttggctgagcgagattcatggcggcatgaag
attacgtacaaagcggacagcaatcagatcagttttctgcaactgctctcgaaaagtgcg
caacagaatatcacgtattattgcaagaacagcgtcgcttacttcgattacgaccggaaa
acgtacagaagaggcctgaagtttttggcttggaacgatgctgaactaacacctcgaggc
aatcagcgttttcagtacgagatgatagttgacggatgtagccatcatcagagccagtgg
gataaaacaattcttttatacgaaacggataaacccacaagacttcctatcttagacgtg
gcgttgcgagacatcgggacatctgaacagagtttctccgtcgagatcggcgcagcttgt
tatcaataa

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