KEGG   Pseudomyrmex gracilis (graceful twig ant): 109851615
Entry
109851615         CDS       T05003                                 
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein homolog
  KO
K20191  Hermansky-Pudlak syndrome 5 protein
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgc04131]
    109851615
Membrane trafficking [BR:pgc04131]
 Endosome - Lysosome transport
  Others
   BLOC-2 complex
    109851615
SSDB
Motif
Pfam: Beta-prop_HPS5 TPR_HPS5_insect Beta-prop_NUP159_NUP214 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR36-Utp21_1st Beta-prop_ACSF4 Beta-prop_Vps41 WDR55 WD40_Prp19 ANAPC4_WD40 Beta-prop_VPS8 zf_RING_Vps8 Beta-prop_RIG_2nd zf-RING_Vps41 zf_RING_Vps8_fungal Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR19_1st Beta-prop_WDR5 Vps16_N DUF7899 dCache_2 PEP5_VPS11_N HisKA_2 Tricorn_2nd RMC1_N zf-RING_11
Other DBs
NCBI-GeneID: 109851615
NCBI-ProteinID: XP_020277436
LinkDB
Position
Unknown
AA seq 950 aa
MYNCQVRLRAPRYNGGCWTMYPVSLDFPYVLLEREEINSILYKPINSTQRIKYTCFHAST
SYIVLGSTSGSVYLFSREPCSFLQIVPLSEGVVSRLAISPDEKTVALATTRGTVCLVSLK
STPQLMAVSTEHICKQITCLCWNNNSAEIYIGDEAGTVSVMILSIFTVNGMFQTPACTLM
SLDSSVVQLNFLSPLLLVSTLSRCYICDTVQEQYKQIGNKPRNGEFGACFYTTHENIISD
VQREEKNINNTRGAFNLISDNHSNNLSENHSKIFCARPGSRLWEVSADGVVVKTHQFKDA
LAVPPTPIFRSCDTLESSHKTDREWSSQSVNFSHLSVIARKYLFSYTTSGLYVIDPASAS
VLLWNDEHTNISMTAIVDNRIYLMTCDNVFHCLALSSLDSLILRLYHRERYSDSLRACFV
YKSQLLRAVGTKEIVELLELEDLPRTSRDEESLALLRPLITLLQTSGGNNRPAKLDSGIV
VVHPENDAFADDKKLYGREMTTVSPETSSEDSSEILETARDLNEGLAPEDAPEIALEDTL
HSNYECGTTSSDDNRQKSNSQENVAHRVQSDLQLIYDLANSIRPSMSEREIEEIVLEMDK
RMRTVRESYRDSSGLQNFIYEVTRAAELHCYNTFLENTSGQLLRTTRNDYIVRQFARAFI
EVNAPAYARCSCGYPCPMDEAVEPKFLTIGELLIKRHANETPEECGNICDKVPYMWREYL
AVCVERRNTLDDLLRQCLQTRDNVVLSFLLPALNEQQWGCVNMCLNEIADGTCLFCAMPL
ARKPDYDVLMDWSGIAREIMRREGPDQAAAFLTKLESMIPNVKLDRSVFQSIVFTKMLHH
RGLKKSIDFSKTNQLSSKFGTVCSAQVREQLAKTLEKDLRRAIDKNVFGTSAHHWGMRYQ
TKSSTCPCCTLSLQTPILLGNSGIAIFRCGHAYHVNCMIERKLTRCNLHQ
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgtacaattgccaagtgcgattgcgcgcgcctcggtacaacggaggatgctggacgatg
tatcccgtatcgctggactttccttacgtcttgttggaacgtgaggaaatcaactcgatc
ctgtacaagccaatcaattccacgcaacgaattaagtatacatgtttccatgcttccaca
agttacattgtgctgggctcgaccagtggcagtgtttatttgttctccagagaaccatgc
tcatttttacaaatagtacctctctcggagggtgtagtttcgcgtctggcgatatcacct
gacgaaaagactgtagccttggcaacaacacgcggcaccgtctgtctagtctctttgaag
tctacaccgcaactgatggctgtgtccacggaacacatatgtaaacaaatcacctgcctc
tgttggaacaacaacagtgctgaaatatacataggagatgaagctggcaccgtttccgtc
atgattctatccatatttacagttaacggaatgtttcaaactccggcctgcacgctgatg
agtttggattccagcgtggtacagctgaacttcctgtcgccccttctgctggtgtccacg
ttgtcgcgctgttacatctgcgacacggttcaagagcagtacaaacaaataggcaataag
ccgcgtaacggcgagttcggcgcgtgtttttacacgacgcacgagaacattatctctgat
gttcagcgcgaagagaaaaacatcaataacacacgaggcgcgttcaatctgatttccgac
aaccacagcaacaatctgagcgagaatcactccaagatcttttgcgcccggcctggctcg
cgattgtgggaagtgtcggccgatggtgtcgtcgtgaagacgcaccagttcaaggatgct
ctcgccgttcccccgacgccgatatttcgatcgtgcgacactctggaatctagtcacaag
acggatcgcgagtggtcctcgcaatccgtcaacttctcgcatctgtccgtgatcgcgcgc
aagtatttattttcctacactaccagcggcctgtacgttatcgatcccgcgagcgcgagc
gtgctgctgtggaacgacgagcacacgaacatcagcatgaccgcaatcgtggacaatcga
atttacctgatgacctgtgataacgtttttcattgtctagcattatcctcactcgacagc
ctaatattgcgtctgtatcatcgcgaacggtacagcgacagtcttcgcgcgtgctttgta
tataagtcgcagttgttgagagccgtcggcaccaaggagatcgtcgagctgctcgagctg
gaagatctgccgcgcacgtcacgggacgaggaatcgctcgcgttgctgcggccgttgatc
acgttactgcaaaccagcggtggcaataacagaccggctaaattagattccggaatcgtg
gtcgtacatcccgagaacgacgcgttcgcggacgataaaaagttgtacggtcgcgaaatg
acgaccgtgtctcccgaaacgtcgagcgaagactcgtccgagatactggaaactgcgaga
gatctgaatgagggtctcgcaccggaagacgcgcccgaaatcgctttggaagatactctt
cattcgaactacgagtgcggtactacctcaagtgacgacaatcgtcaaaagtcaaattcg
caagagaacgtggctcatcgagtgcagtccgatttgcagctgatctacgatctggcgaac
agcatcaggcctagcatgtcggagagagagatcgaggagatcgttttagagatggacaag
agaatgagaaccgtcagagagtcgtacagagactcgtccgggctgcagaatttcatctac
gaggtaactcgcgccgcggaacttcattgttacaacacgtttctggagaacacgtccggg
cagttgctccgcaccacccgcaacgattacatcgtgcgacaattcgcgagagcctttatc
gaggtgaacgcgcccgcttacgccagatgcagttgcggctatccctgtcccatggacgag
gccgtggagccgaagtttctgacaatcggcgagttgctgatcaaacgacacgcgaacgag
acgccagaggagtgcggtaacatctgcgataaagtaccttacatgtggcgcgagtatctg
gcggtttgcgttgagcggcgcaacacactggacgaccttttgagacagtgccttcaaacc
agagacaacgtcgtgctgtcgtttctcctgcccgcgctgaacgagcaacagtggggctgc
gtgaacatgtgtctgaacgagatcgcggacggtacttgcctgttctgcgcgatgccgtta
gcgaggaaacccgattacgacgtgctgatggactggagcggtatcgcccgagaaatcatg
aggagagagggaccggatcaggccgcggcgtttctgaccaaactagagagcatgataccg
aacgttaaattagacagaagcgtgttccagtcgatcgtatttacaaaaatgctgcaccac
cgcggtctgaagaagtcaattgacttcagtaaaactaatcagttatcgtcgaagttcggt
acggtgtgctcggcacaggttcgcgagcaactggcgaaaactctcgagaaggatctgaga
cgggcgatagacaagaacgtgttcgggacgagcgctcatcactggggtatgcgctaccaa
acgaaatcgtcgacgtgcccgtgctgcacgttgtctctacagacaccgatactactaggt
aacagcggaatcgccatcttccgttgcggtcacgcttaccatgtaaattgtatgatagag
agaaagctcacgagatgtaatcttcatcagtaa

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