KEGG   Pseudomyrmex gracilis (graceful twig ant): 109851666
Entry
109851666         CDS       T05003                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03030  DNA replication
pgc03410  Base excision repair
pgc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109851666
   03410 Base excision repair
    109851666
   03420 Nucleotide excision repair
    109851666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgc03032]
    109851666
   03400 DNA repair and recombination proteins [BR:pgc03400]
    109851666
Enzymes [BR:pgc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109851666
DNA replication proteins [BR:pgc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    109851666
DNA repair and recombination proteins [BR:pgc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      109851666
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 109851666
NCBI-ProteinID: XP_020277551
LinkDB
Position
Unknown
AA seq 2233 aa
METLENTGAFRPQKTNKNPNQEGNISGENALGRLLEIKENIRIDAAYGFRRVADSKERIG
FLLNMHATEIVEDDKRLLSGVDYYFIEEDATRFKVSLPYFPYFYILCRKDTLVEVSTFLS
KKYVGILMKIETVYKEDLDLPNHLIGLKQQYLKLSFANTVDLTKVKRDIMRVVKVNKERE
KNNSHYTNMLATTLQSTEQDNKQSLGHMDNILDIREHDVPHHVRVSIDANIFCGTWYSVK
SRGSEPPMITRKEGMIEPPDPIVLAYDIETTKLPLKFPDSSIDQIMMISYMIDGQGYLIT
NRELISADIEDFEYTPKPEFEGPFTIFNEPNEKATIERFFDHINEIKPHIFVTYNGDFFD
WPFVEARAAVHNMNMKERIGFSKNRDGVYVSRSAMHMDCLCWVRRDSYLPVGSQNLKAVA
KAKLRYDPVELDPEDMCRLALEEPEVLANYSVSDAVATFYLYQKYIHPFIFALCTIIPME
PDEVLRKGSGTLCESLLMVQAFRANIIFPNKQESELNKLTKDGHLLDQETYVGGHVEALE
SGVFRADIPCRFKIVPSAIDQLMTGVEKALKHTIEEEEKVPIQMVTNFDKIVDEVKGKLQ
ALKDQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAIVNEMDCAVCDYNKPDAVCQRKMK
WMWRGEYLPASLGEYQRVKLQLETERFPSQFPGGSKRAFHELSATEQAMFQKKRLTEYCK
KAYKKVKITRTEERTQTVCQKENSFYVDTVRAFRDRRYEYKALTKVAKKQVATAIAKGDA
ADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMGGIVCYTGAHIIMKARE
IIEQIGRPLELDTDGIWCILPASFPDSIIVHTTQEKKSKFTISYPNAVLNFMVKDQFTNE
VYHELTDRDNLTYEIRSENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAEL
KGFEVKRRGELQLIKIFQASVFESFLKGDTLEECYASVAKDADYWLDLLYSKCENMPDSE
LFELISENKSMSRKLEEYGAQKSTSISTAKRLAEFLGDEMVKDAGLACRYIIANKPQSAP
VTERAIPLAIFQSEPAVRRHHLKKWLKDPTLYSDNIRDILDWNYYIERLGSAIQKIITIP
AAMQGLPNPVPRVQHPPWLHKKVTEKSASHRQKKITDIFTVSVKESTDTTEEPRDIEDLA
GPSTSFKNSSVSIVNKRKRLHSDEDEAVRAKSWKEALGSPPPMGKTREEMLKWLEFHKKK
WAFQAKQRHQHRQKRSKTSDNDNVGWGVIRNANTSTMTGFLRRAQRKLLETPWQIVQLSE
TGEPGMFRLWILVDTQLHQVRLVVPRIFYVNTRKARPDPGPNELWKKSFKSLPRSRPVYN
LYRYALPESLFQKHSRELLEDLSKPEIEGIYETQMSLEFRAILQLGCVCIVDPRAARRMA
DGADTFTLDQLEYKSIAFHPYIQQTEAINYIFLYHHWSSNHQRALWGLFLSASKKTHVFV
LDSVTTNQLPNMSTLYTQERKATLEKSGEDKINRLPKTMQFTVQVETSFQQICRMLQSIL
TTYKNEGHGATIIVNQTAIDKTTLTTEMPLLNEFPLINTHVRDVENLYGTLEWQKIGARM
MIRHYLKSQQIVELMAEQCRFFHAPIGNIPADPTLFGTDLFYARHLHRNNFVLWCSPTEK
PDLGGSENDDNRLLTDFEESSSCAANNSGSYSSVCVQLDVESLAVNALLQYHHIHDIDGT
STFVAFHNQQRPSVQDMATGNDATIIPSYDEITLCNPAFKTLRSMVNAWILDVSMYKNVF
ADYQLIHFYRWLRSPSALLYDPALRRTLHTYMKKLYIQLIAEFKVLGCIIVFANFNKIIV
CTKKRSVGDALGYIEFVVQTIRNKELFHGIEITFDQCWEYLIWHDLHNYAGIKGKISRDA
EDQESAENDDDEPEIIMNWSLMECLPDEAGCRSSFSAITAGYINAVYQCMMENEANNTVR
PRRRLSQSSFTLGLGALENAAEYAKKLISGEMSQRLFKIVQKIHRNLPEKTLTLVDYPNL
DMGGKESIKINPALELIKALCKILSLDKEVEYEVYNLKANLLRLIGVNNFSDNVEWKDPC
ISFILPEVICKACNHTRDIDLCKDQHCAIENNTHLWKCPICDTSYDNTEIEFSLIDKLNR
KSMGYVLQDQQCRKCKEIKRDNMNILCPCSGEYANLISRNEITTLVNICKSVAKKCKMNI
LSEIVDNAKLIIS
NT seq 6702 nt   +upstreamnt  +downstreamnt
atggagactttagaaaatacaggagcttttcgcccacagaagacaaacaaaaatccaaat
caagaaggcaatatttcaggagaaaatgcattaggaaggttacttgaaattaaagaaaat
attagaattgatgctgcttatggatttcgtagagttgcagactcaaaagaaagaatagga
tttttactgaatatgcacgcaactgaaattgtagaagatgataagcgtctgttgagtggt
gtggattactacttcatagaggaagatgccacacgatttaaagtatccttaccatatttt
ccatatttttacattttatgccgcaaagacactcttgtggaagtttccacgtttttatct
aagaagtatgtaggaattctgatgaaaattgaaactgtttacaaagaagatcttgacttg
cctaatcatttgattggtttaaaacaacaatacttgaaactttcttttgcaaatactgtt
gatttaacaaaagtcaagcgagatattatgcgtgtcgttaaagtaaataaagaacgagag
aaaaacaattctcactatacaaacatgttagcaactaccttgcaatcaactgaacaagat
aataaacaaagtttaggtcatatggataatattcttgatattagggaacatgacgtgcct
catcatgtccgagtatctatagatgctaatatattttgcggaacttggtattctgtaaag
tccagaggaagtgaaccgcctatgattactcgaaaagaagggatgatcgaaccacctgac
cctattgtgttagcatatgatattgaaactacaaaattaccattgaagtttccagattca
agtatcgatcaaattatgatgatatcatacatgatagatggacagggatacttaataaca
aacagagaattaatctcggcggacatagaagattttgaatatacaccaaaaccagaattt
gaaggcccatttactatattcaatgagcctaatgaaaaggcgacgatagaaagatttttt
gatcatatcaatgaaataaaacctcatatatttgtaacatataacggtgattttttcgac
tggccatttgttgaagctcgggcagctgtacacaacatgaacatgaaggaaagaattggt
ttttctaagaatcgtgatggtgtttacgtcagcaggtctgctatgcatatggattgctta
tgttgggtaaggcgtgactcttacctcccagttggctctcagaatttaaaagctgttgcc
aaagctaagttgagatatgatccagtcgaacttgatccagaggatatgtgcagattagca
ttagaagaaccagaagttttggcgaattattctgtttctgacgctgtggcaacattttat
ctttatcaaaagtacattcatcctttcatattcgcgttatgtaccattattcctatggaa
cctgatgaggttcttagaaagggatctggaacgctgtgtgaatcgcttctcatggtgcag
gcgtttagagccaatattatatttcctaacaaacaagaaagcgaactaaataaattgaca
aaagatggtcatttattggatcaagaaacttatgtgggtggacatgtggaagcgctggag
tccggcgttttcagagctgatattccttgtcgctttaaaattgtaccaagcgctatagat
cagttaatgaccggtgtagaaaaagctttgaaacatacgatagaagaagaggaaaaagta
cctattcaaatggtcacaaattttgataaaatagtggatgaagttaagggaaagttgcag
gctctcaaagatcaacctttgagattagaaaatcctgtaatttatcacttggatgtaggc
gccatgtatccgaacattattttgaccaacagactgcaaccttccgcgatagtgaatgaa
atggattgcgcggtttgcgattacaataaacctgatgctgtttgtcagaggaagatgaaa
tggatgtggaggggcgaatatcttcctgcaagtttgggtgaatatcaaagagtcaagttg
caattggaaactgaaagatttccatcgcagtttcctggtggttctaaaagagcttttcat
gaattaagcgcaactgaacaagcgatgtttcaaaaaaagaggcttactgaatactgtaaa
aaggcttataaaaaagtcaaaattactagaacggaagagagaacgcaaacagtttgtcag
aaagaaaattcattttatgtagacactgtgagagcatttagagacagaagatatgaatac
aaagcgttaactaaggttgccaaaaagcaagtagcaacagcgatcgcgaaaggggatgca
gctgacataaaatctgccaagaatagagaagttttatatgactctcttcaacttgctcac
aagtgtattctcaattccttttatggttatgttatgagaaagggggcacgatggcatagt
atggaaatgggtggtattgtatgttacacaggagctcatatcatcatgaaagctagagaa
atcatagaacagattggtcgtccattggaattggataccgacggtatatggtgcatatta
cctgcatctttcccggattctattatagttcacactactcaagaaaagaaatccaaattc
acgatttcgtatccaaatgcagttctcaattttatggtgaaggatcaatttacaaatgaa
gtatatcacgagcttacggacagagataatttaacatacgagatcagaagcgagaattct
atatttttcgaagtcgacggtccgtatctggcgatggtgttgcccgctgccaaagaagaa
ggaaaaaaattaaagaaacgttacgcagtttttaacttcgacggttcgctggctgaatta
aaaggttttgaagtaaaaagaaggggcgaactacaattgataaaaatctttcaagcttcc
gtttttgaatcgtttttaaaaggtgacacgttagaggaatgttacgcttcggttgcgaaa
gatgccgattattggctggacttgctttacagcaagtgcgagaacatgcccgattccgaa
ttattcgaactcatatccgagaataaatctatgtcgcgtaaattggaagaatacggtgct
caaaaatcgacctcaatctctacggctaagagattagccgaattcttgggtgacgagatg
gttaaagacgcgggtttagcttgtagatatatcatagcgaacaaaccgcaaagcgcaccg
gtcaccgagcgtgcgataccgctagcgatttttcaatcagaaccggctgtgcgaaggcat
catctgaagaaatggctgaaagatcccactttgtacagcgataacataagagatatctta
gactggaattattatatcgaacgactcgggagtgccattcaaaaaataatcactataccc
gcggcgatgcaaggcttgcctaatccggttccgcgagtacagcatccaccttggttacat
aagaaggttacggagaaaagcgcgtcacaccgtcagaaaaagatcacagatatatttact
gtgtccgttaaagaaagcactgacaccaccgaggaacctcgcgacatcgaggatctcgca
ggaccatcgactagtttcaagaactcatcggtttcaatcgttaacaagaggaagcggttg
cattcggatgaagacgaggcagttcgagccaaaagttggaaggaagctctgggttcacct
ccgcccatggggaaaacgagagaagaaatgctcaagtggttggagtttcataaaaagaaa
tgggccttccaggctaaacagagacatcagcatcgacaaaaaagaagcaagacaagcgac
aacgataacgtcggctggggagtgatacgaaacgcgaacacgtctactatgactggtttc
ttgagacgtgctcaaaggaaattgttagaaactccttggcagattgtccagttatcggaa
acgggcgaacctggcatgtttcggttatggatattggtcgacacgcagctacatcaagtg
cgtctcgtagtacctcgcatattttacgtgaatactcgtaaagcgagaccggacccagga
cctaatgaactctggaagaagagcttcaaatccttaccacgttctcgtccggtatacaat
ctgtatcgatatgccctgccggaatctctgtttcagaagcatagtcgggagcttctagaa
gacttgagtaaaccagaaatcgaaggaatttacgagacgcaaatgtcgctggaattccga
gctatattgcaattaggatgcgtgtgtatagtcgatccacgtgcagcgcgcagaatggca
gacggagcagacacgtttactctggatcagttggaatacaaaagcatcgcctttcatcct
tatatccaacaaactgaggcgattaactatatattcctctatcatcattggagctcaaat
catcaaagagcgttatggggcttgtttttaagcgccagcaagaagactcacgtattcgtt
ttggattcggtcacaacaaatcaattgccaaatatgagtacattatacacgcaagaacgt
aaagcaacgttggagaagagcggtgaggacaaaataaacagactgccaaaaaccatgcag
tttacggtgcaggtcgaaacgagctttcaacaaatatgtcggatgttgcagtctattttg
acgacatacaaaaacgaaggtcacggagccacgattatcgttaatcaaaccgcaatcgac
aaaacgacactgaccaccgaaatgccactgctcaatgaatttcctctcattaacacgcac
gtgcgggacgtcgagaatctgtacggcacgttagagtggcaaaagataggcgcgaggatg
atgatacgacattacttgaagagccagcagatcgtcgaattaatggcggaacaatgtcgt
ttctttcacgcaccaattggaaacatacccgcggatcctactcttttcggtacggattta
ttttacgccagacacttgcacagaaacaactttgtcctgtggtgctcgcccacggagaag
cccgatttaggcggcagcgagaacgacgataacagattgctgacggattttgaagagagc
tcgagctgcgccgcgaacaattcgggctcatattccagcgtgtgcgtccagttggatgtg
gaaagtctggcggtcaacgcgttgctgcagtatcatcatattcacgacatagacgggacg
agtacgtttgtggcgtttcacaatcagcaacgtccgtctgttcaggatatggcgactggc
aacgacgcgacaattattcccagttacgatgagatcactctctgcaatccggcatttaaa
acgttgcgcagtatggtaaacgcctggatactcgatgtgtccatgtataaaaacgtgttc
gcggattatcaactgattcacttctatcgatggctaagatccccgagtgctctgctttac
gatcccgctctacgtcgtactctgcacacttacatgaagaagttgtatatacaattgata
gcggaattcaaagtattgggttgtatcatagtctttgcaaactttaacaagatcatcgtg
tgcacgaagaagcgatccgtgggcgatgctttaggctacatagagttcgttgttcagacc
atacgaaataaggagctgttccatggcatcgaaattacattcgatcagtgttgggaatat
ctgatatggcacgatttgcacaattatgctggtatcaaagggaagatatcgagggatgcc
gaagaccaggagagcgccgaaaatgacgacgacgagcctgaaataataatgaattggagc
ctgatggagtgtttacccgacgaagcgggatgccgatcaagtttcagcgctataacagca
ggatacataaacgcggtgtatcaatgtatgatggagaatgaagctaacaatactgtgaga
ccgagacgaagactcagtcagtcttcgttcacacttggattaggcgcgttagaaaatgca
gcagaatacgcgaagaaattgatatcgggagaaatgtctcaaagattattcaaaatagtg
caaaagatacatcgaaatttaccggaaaagacattaactctcgtagactatccgaatttg
gatatgggcggaaaagaaagtataaagatcaatcctgcccttgaattaatcaaagcatta
tgcaagattttgtcgttggacaaggaagtggaatacgaggtttataatttgaaggcgaat
ctgttacggctgatcggggtcaacaatttcagcgataatgtcgaatggaaggatccgtgt
atttcgtttattttgccagaagtcatatgcaaagcgtgtaatcacacgagagacattgat
ctttgcaaagatcagcactgtgcgattgaaaataatacgcacttgtggaaatgtcctatc
tgcgatacctcttacgacaatacagaaatagaattctcgttaattgacaaattgaatcgc
aaaagcatgggttacgtgttgcaagatcagcagtgtcgaaagtgcaaagaaatcaagcga
gacaacatgaacatattgtgtccctgttcaggcgagtatgccaatttgatctcgcgaaac
gaaatcacaacacttgtaaacatatgcaagtccgtagccaaaaaatgtaaaatgaatatc
ttatcagagatagtggataacgcaaaactcattattagttaa

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