Pseudomyrmex gracilis (graceful twig ant): 109851724
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Entry
109851724 CDS
T05003
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109851724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgc03000
]
109851724
03021 Transcription machinery [BR:
pgc03021
]
109851724
03036 Chromosome and associated proteins [BR:
pgc03036
]
109851724
Transcription factors [BR:
pgc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
109851724
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109851724
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109851724
PBAF complex
109851724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109851724
NCBI-ProteinID:
XP_020277660
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MALPTNYKQVAMATSNIVASNQRIRASGGSSSSSTNSKDTQNPFIQTPHSHPGFTPQKVG
KNTNADSRMPKPPKPPEKPLMPYMRYSRKVWDQVKAQNPELKLWEIGKIIGQMWRDLPEE
DKTEFIEEYEAEKVEYEKSLKTYHNSPAYLAYIAAKNRGKSALCAAQQNNDDRESHERSS
GSSKSQAAQDRRIDILPAEDDDDQDDGYSVKHVAYSRYTRNHRLINEIFSDTVVPDVRSV
VTTQRMQVLRRQVQSLTMHQKKLEAELQQIEEKFEAKKRKFIETSEIFQEELKKHCKPAV
DEETFNKMVERQYEALRRERLKGIEENRSDGPASSESTPNSTPTPTPASLNDETQPDVSD
NDSIEKKSGGTDKSNVEMNKKMSPPYNESKPEPPSAIHANINQQQHPPGMYCNNMVNPIQ
QHPHQQQTQTSQHPPPTPPQHQPSQPPQQSPHQPPPPAQQHQLPPPQQHQPPPPQHQAPP
QPPSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQXQQQQQQPTQVLPPQQQQPTTTSA
AAAAVAAVVASANATANSTPPPPPPPSSGMPLVSASVLPIQQHNPHQQGMLPNHSMPPHQ
AATAQGPSSGAPQVLPPQGPVTNPHTPQMMPPNQAYGQQYQSAPGPQQPQNVPLAPRPPH
PTYSYSQQQPYHQPYQYAHPYYHQPYSQYPPHPMGRPHGHGPHSPHSPHYHPQSPHTVPP
ESSNANANVPSGSAAAAAAAAAAAAAAASAAAPEANNPASYSSPAGHCENERSGPTENQE
GQVDAKSGPA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggctttgccaactaattacaaacaagttgcaatggctacttcaaatattgtagcgtcg
aaccaacgtataagagcttctggtgggagttcaagtagttcaacaaatagtaaagataca
cagaatccatttatacaaactccccatagccatccaggttttacacctcagaaagttggg
aaaaatactaatgctgactctcgtatgccaaaaccacctaaaccaccagagaagcctctt
atgccatatatgagatatagcagaaaagtatgggatcaggtaaaagctcagaatccagaa
ttaaagttatgggagataggaaagatcattgggcaaatgtggagagatttgccagaagaa
gataagacggagtttattgaggaatatgaggctgagaaggtggaatatgaaaaaagttta
aaaacctatcacaattcacctgcatatttagcttacatagcagccaagaatcgaggaaaa
tctgcattatgtgcagcacaacaaaacaatgatgatcgagaaagtcatgaacgttcatcc
ggcagcagtaagagtcaagccgctcaagacagaagaattgatattttaccagctgaagat
gatgatgatcaagatgatggatattctgtgaaacatgtagcatattcgcgttacacgaga
aaccatcgactgattaatgaaatctttagcgacaccgttgttccagatgtacgttctgta
gttacaactcaaagaatgcaggttttacgccgtcaagtacaatctttaacgatgcatcag
aaaaagcttgaagcagaattgcaacaaattgaggaaaaattcgaagcaaagaaacgcaaa
ttcatagaaactagcgaaatattccaagaagaattaaagaagcactgtaaaccagcagtt
gatgaggagacatttaacaaaatggtggaacggcaatacgaagctctcagacgagaaaga
ttaaaaggaatagaggagaatcgttcggacggaccagcgtctagcgaatctactccgaat
tccactccaaccccaactcctgcatcgcttaatgacgaaactcaacctgatgtttctgac
aacgactcgatcgagaaaaaatctggtggtactgataaatccaatgttgaaatgaacaag
aagatgtcgcctccgtataacgagagcaaaccagagccaccatcagctatacacgcaaac
atcaatcagcaacagcatcctcctggaatgtactgcaacaacatggtgaatccgattcaa
caacatccgcatcagcaacagacgcaaacatctcaacatcctccacctacgccgccgcag
catcaaccttcgcaaccacctcagcaatcaccgcatcagccacctccgccggcgcagcag
catcaactgccgcctcctcaacagcatcagccaccgccaccgcagcatcaggcgccacca
caaccgccgtctcaacagcagcagcagcagcagcagcagcaacaacaacaacaacaacaa
caacaacaacagcagcagcagcagcagcagcagcagcaacaacaacaacancaacaacaa
caacaacaaccaacacaggtactaccgccgcaacaacaacaaccaactacgacatccgcc
gctgcggctgcagtcgcagcagtagtcgcgagcgcaaatgcgaccgcgaattctacaccg
ccgccgccaccaccgccgtcaagtggtatgccactcgtatccgcatcggtgctgccgatt
caacagcataatcctcatcagcaaggaatgttaccgaatcattcgatgccgccgcatcag
gcagcgacagcacaaggaccttcttcgggtgcgccgcaagtattaccaccacagggacca
gtaacaaatccgcatacaccgcagatgatgccacctaatcaagcgtatggtcagcaatat
cagtccgcgcctggtccgcagcagcctcagaacgtgccacttgctccacgaccgccacat
cccacttacagttattctcagcaacaaccgtatcatcaaccttatcagtatgctcatccg
tactatcatcagccgtattctcagtatccgcctcatccaatgggtcgtcctcatggtcac
ggtcctcacagtcctcacagtcctcattatcatcctcaatcaccccatacagtccctcct
gagagtagcaacgccaatgctaatgttcctagcggttcagcggcagcggcagcagcagca
gcagctgccgctgctgctgctgcttctgcagcggctcctgaagctaacaatcctgcttcc
tactcttcacccgcaggacattgcgagaacgaacgctccggtcctacagagaatcaagag
ggtcaagtagacgctaagtcgggaccagcttaa
DBGET
integrated database retrieval system
