KEGG   Pseudomyrmex gracilis (graceful twig ant): 109851756
Entry
109851756         CDS       T05003                                 
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109851756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109851756
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     109851756
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_EIPR1 NBCH_WD40 Ge1_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 Tricorn_2nd Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 eIF2A PROPPIN Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_NWD2_C Cytochrom_D1 Beta-prop_DCAF4 Beta-prop_WDR75_2nd MIOS_WD40 WD_LRWD1 Beta-prop_pof12 Beta-prop_DCAF12 VPS8_N
Other DBs
NCBI-GeneID: 109851756
NCBI-ProteinID: XP_020277735
LinkDB
Position
Unknown
AA seq 329 aa
MYSLTHKTENAHEDSIWTCAWGCPKKKKNSEPNEDNEDSRDSVRSAEEETVEYLVTGSVD
DAVKVWEFMDGALRVKHRLTGHSLGVVSVAVSSDGSKCASSSLDSSLKLWDLLSGEKLTS
IDVGPVDIWTVVFSPDDKFVVSGSHAGKIHLYGTESGKQEQTLDTRGGKFTLSVAYSPDG
KYIASGAIDGIINIFDVAYGKVLRTLEGHAMPIRSLCFSPDSQLLLTASDDGHMKLYDVK
DANLAGTMSGHASWVLGVAFSPDGQQFASSSSDHTVKVWELAQRQCLHTFNEHKDQVWAV
KYNPLRNNIITSVSEDKSINLYECPMYDT
NT seq 990 nt   +upstreamnt  +downstreamnt
atgtattctttaactcacaaaacagaaaacgctcacgaagacagcatatggacttgtgca
tgggggtgtcctaagaaaaagaaaaatagcgaacccaatgaagacaatgaggactcgcga
gattctgtacgatctgccgaagaggagacagtggaatatttagtgaccggctcagtagat
gatgctgtaaaagtgtgggaattcatggatggtgctttgagagtaaagcacaggttaact
ggacattccttgggagtagtatctgtagctgtcagctcagatggatcaaaatgtgcttcc
agttcacttgactcaagtttaaaattatgggatttgctatccggagaaaaactaaccagc
attgatgttggtccggtggatatttggactgtggtattttctccagatgataagttcgtt
gtatctggcagtcatgcaggtaaaatacatttatatgggactgaatctggtaaacaagaa
caaacattggacacaagaggtggaaaatttactctgagtgtagcttatagtcctgatggt
aaatatattgcaagtggtgcaatagatggaattattaatatttttgacgttgcttatgga
aaagtattgcgtacgctagaaggtcatgcgatgccaatcagatctctgtgtttctcaccg
gattcccaattgctgctcacagcatctgatgacggacacatgaagttgtacgatgtcaaa
gatgcaaatctagcaggaacaatgtcaggacatgcttcttgggtactcggagtggctttc
tcaccagatggacagcagttcgcatcgagcagttccgatcatacagtcaaggtttgggaa
ttagcgcaaagacaatgtttgcatacattcaacgaacataaagatcaggtatgggcggta
aaatataatccacttcgaaataacataataacgtcagtgtccgaagacaaatctatcaat
ttgtacgaatgtccgatgtacgatacgtaa

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