Pseudomyrmex gracilis (graceful twig ant): 109852063
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Entry
109852063 CDS
T05003
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109852063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109852063
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
109852063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_16
TPR_2
TPR_19
TPR_1
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_11
ARM_TT21_C
ANAPC3
TPR_9
TPR_6
TPR_7
BTAD
DUF7017
PknG_TPR
Alkyl_sulf_dimr
TPR_21
DUF5588
DUF6584
FIMAH
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
109852063
NCBI-ProteinID:
XP_020278469
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MSDEVKTLLKEARESFKQNEHLETMKKCKKILKKDKNNYTALLLLARAMQEVEEFKSQVA
LVLQKAVEVQPGNPLAWQGLVAYYEKGQSQNNGNLEKLATAYCKLLQLDSDSPKFTSFVN
KVSEIGLKTKDDEVLSEILDTMSVIRNTSTKEKRSLIEKTLAWMLTEHSNHTTHKHRELY
ESILASVINDTDLMNRQEYYRKYLKILYDSSKLAVLLETAQDMHMQFPEDVYPLEFICRV
YYEEGILDGHVFEIDIARYYESLLKLKVNSEAAFIARAVHLRSTDKLVNSRECLTHVISA
LNAQSFYAWLMLSQVYYKLYCWEETENASRQALQLMKPRLKDKLQLSIKLRLLEAMSRSS
NKQKLTEARQMCEELLKVDSSVQVQLIHTRINVLLNERDVVATLDDLESREETKIQAVIF
KALRLWKRKQYEEAINALELALEDSEAWLLFGKIYWDMDDYNHSLMAFLNGMQADRNNWE
CLLYLGHYYREHGNDIERSRKCYHAALQINPNSEEAGIGLSTAYRLLKNTDANIQLLQRV
TMQGNGPKWAWLQLGLHHLDQGDAEQAIKALQHVIRADPNDNHSWESLADAYLARGAHTS
ALKSYQRALELSPESLYPLIQLAHIKVLIGQHKEAKEDFESILQHEKKHIFALKGLAQAC
LGLAKENIAKQFLCRARENLQQAADSLTDAVMVRGDLSCTWKLFGDVCYKLTTLPEKYCY
LEVKRILMKFDNIDNIDEHVIIKGNEIVTLSVRWFCRALSITPNSALLWHDLACCYLMQL
NRNFTNDKTDVAAKCLAAAKHAVKLHPHSWLHWNVLGVACMSPHIKNYALAQHCFVMAID
RELNNAVAWNNLGTLYLQLGDLYKANEAFSRAQRADPSYMNSWIGQGFIAESLAKPLRKE
AMDLFRHSTQLGYHNQAALGYAHSVLTTLLDPAKEKDPLFVYAIENMHAVPAATDAMTWY
TEREPNDVHALNTYGLLLERQKLYNTAAKQFVTALELTQDEDERDILSVNLARVLIQIGE
HEKAVKLCRQVKCVTFISQYHLALSLFKAKQYEESYNSYETALHWLADTEDHKANVLCAM
AAIAHIFQGADAVKTLLFQCIQIEPPSVVGFLATAALGILHDDFNLASLVLKELKRYEDH
PEYGHHVVTLFAYYHVKQKNLTEAIRILSKAIFRHPNDIRYWVRLVRISLLDTNLEIFRK
SAQAALVLSRNTSMTDIAYVACASAYGNLGTAKGLRQAQKNIFTYPANVESWINFSAALI
NRGDDKNFKIDSKWMLSLISIMRSQFPTSEDTSRWLHDIAQKIKSLS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaagtaaagaccttgttgaaggaagctcgtgaatccttcaagcagaatgaa
catctagaaactatgaagaaatgcaaaaagatcctgaagaaggacaaaaacaattatacg
gcattacttttgttagcacgtgccatgcaggaagtagaagaatttaaatcgcaagttgcc
ttggttcttcaaaaagcagtggaagtgcaacccggcaatccattagcttggcaaggtctg
gtggcgtactatgaaaaaggacaatcgcagaacaatggaaatttggaaaaattagctaca
gcttattgcaagctcttgcaattggatagtgactctcccaagtttacctcctttgtaaac
aaagtttctgaaattggactaaaaacaaaagacgatgaggtgctgtctgagatattagat
acaatgagcgtaatacgaaacacttcaaccaaggagaagagaagtttgattgagaaaact
ctagcttggatgttgacagaacattctaatcatacaacacacaaacaccgagaactttat
gaaagtatattggcatctgtgataaatgataccgatctgatgaacagacaggagtattac
cggaaatatttaaagatcttgtacgattcaagcaagttggcagtccttttggaaacagct
caggacatgcacatgcaatttccagaagatgtttatcccttagaatttatatgccgagtc
tattatgaggaaggaatactggatggacatgtatttgagatcgatatagctcgttattac
gaatctctcttaaaattgaaagtgaattctgaagctgcgttcatcgcaagggctgtgcac
ttgagaagcaccgacaaactagttaattcccgtgagtgtttaactcacgtgatttccgcg
ttaaacgcgcagtcgttttatgcttggttaatgttgagccaggtttactataagctttat
tgctgggaggaaaccgagaacgcttccagacaagcgctgcaattaatgaaaccacgtttg
aaagataagcttcagctcagtattaagttgagattactcgaagcgatgagcagaagtagc
aacaagcaaaagttgacggaggcgcgacagatgtgcgaggagttgttaaaggtcgattct
tccgtacaagtgcaactgatacacacgcggataaacgtattactgaacgaacgcgatgtt
gtcgctacattagacgatctcgagtctcgggaggagactaagatccaagctgttattttc
aaagcgttgcgcttgtggaaacgtaaacaatatgaggaagccattaacgccctcgagcta
gctttggaggattcggaggcttggttactgtttggtaaaatttactgggacatggacgat
tataatcacagcttgatggcttttctgaatggcatgcaagctgatcgcaataactgggaa
tgcttgctgtatcttggacattattatcgcgaacacggtaacgacatcgaacgctcgagg
aaatgttatcacgccgcgttgcagatcaatccgaattccgaagaggccggcatcggattg
agcactgcttatcgacttctcaagaacactgacgctaacatacagctattgcaaagagta
accatgcagggcaatgggccgaagtgggcgtggctgcaattaggcttgcatcacttggat
caaggtgacgccgagcaggccatcaaggcattacagcatgtgatccgagccgatcctaac
gacaatcacagctgggaatctctggcggacgcgtatttagcgcgtggcgcgcacacatcg
gcactgaaatcttatcaacgcgcgttagaactgagcccggagtctttgtatcctctgata
caacttgcgcatattaaagtgctcattggccagcataaggaagccaaggaggatttcgaa
agtatattgcaacacgagaaaaaacatatttttgcattgaaaggcctggctcaggcgtgt
ttgggtctggcgaaagaaaatatcgctaagcagtttctgtgccgcgcgcgagaaaatctg
caacaagcggcggatagtctgacagatgctgttatggtacgcggcgatttgtcttgcact
tggaaattgttcggcgatgtgtgctacaaactgactactttgcccgaaaagtattgctat
ctagaagttaagcgtattttaatgaaattcgacaatatcgacaatatcgacgagcacgtg
ataataaaagggaacgagatagtcacgctctcagtcagatggttttgtcgcgcgctatcg
atcacaccgaattccgcattgttgtggcacgatctggcgtgctgttacttgatgcaacta
aatcgcaatttcacaaacgacaaaactgatgtagcggccaagtgtctagctgctgcgaaa
catgccgtcaaactccacccgcattcgtggctccattggaacgttctgggtgttgcttgc
atgtcgcctcatataaaaaattatgctctggcgcaacattgtttcgtcatggcgatcgat
cgagaattaaataacgctgtggcttggaacaatttgggaacgttgtatctacagttagga
gatctttataaagctaacgaggcgttttctcgagcccaacgcgcggatcctagctacatg
aacagctggatcggtcagggattcattgcggagtcgctggcgaaacctttgaggaaggaa
gcgatggatctgtttcgacattccacacagttgggctatcacaatcaggcggctttgggc
tacgctcactcggtactcacgactcttctggatcccgcaaaggaaaaggatccgctgttc
gtttacgctatcgagaacatgcacgcggtacccgcggcgaccgacgctatgacttggtac
acagaacgcgaaccgaacgatgtacacgctctgaatacctacggtttattattggagcga
caaaaattgtacaatacggcggccaaacaattcgtcacggctttagagttaactcaggac
gaagatgaaagagatatactatccgtcaatttggcacgtgttctgattcagatcggagaa
cacgagaaagcggtgaagttgtgcagacaagtaaaatgcgtgactttcatctcccagtat
cacttagcgttgtccttgttcaaagccaaacaatacgaggaatcgtacaactcgtacgaa
acagccttgcattggctggcggataccgaggatcacaaggcgaacgttttgtgcgcaatg
gccgcgatcgctcatatctttcaaggcgcggacgctgtcaagactctgctgtttcagtgc
atacaaattgaaccgccttccgtagttggtttcttggcaaccgccgctctgggtattttg
catgacgacttcaatctggcttctttggtgttgaaagaactgaaacggtacgaagatcat
cccgaatacggtcatcatgtcgtcacactgttcgcgtactatcacgtcaaacagaaaaat
ctcaccgaagctattcgaattctttccaaagctattttcagacatcccaacgatatcaga
tactgggtgcgtctcgtccggatctcgttgttggacacgaatttggaaatcttccgtaaa
tctgcccaagcagcgttggttctgagcagaaacacgtccatgactgatattgcgtatgtc
gcttgcgcgtcggcgtacggcaacctcggcactgctaagggtctgagacaggctcagaaa
aacatatttacatatcccgcgaacgttgagagctggattaattttagtgccgctctgata
aacagaggcgatgataagaatttcaagatcgacagtaaatggatgctatctttgatatct
ataatgagatcgcaatttccgacttccgaagatacgtcgcgctggttgcacgatattgcg
caaaaaattaagtctctctcttaa
DBGET
integrated database retrieval system
