KEGG   Pseudomyrmex gracilis (graceful twig ant): 109852099
Entry
109852099         CDS       T05003                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109852099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgc03400]
    109852099
DNA repair and recombination proteins [BR:pgc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109852099
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WD_LRWD1 Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Vps41 WDR54 Beta-prop_DCAF4 WD40_RFWD3 RAWUL Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 109852099
NCBI-ProteinID: XP_020278526
LinkDB
Position
Unknown
AA seq 682 aa
MAAHKTVGQNARKKIQVSMVIRDEVEKQHRAGINSLQYDPGLHRLYSAGRDSIIRIWNCR
NIKDPYIQSMEHHTDWVNDIVLCCNGKNIISASSDTTVKVWNAHKGFCMSTLRTHKDYVK
ALAYAKDREQVASAGLDKSIFLWDVNTLTALTASNNTVTTSSLNGNRDSIYSLAMNQSGT
IVVSGSTEKVLRVWDPRYCSKLMKLRGHTDNIKALVLNKDGTQCLSASSDGTIKLWSLGQ
QRCVQTFRVHKEGVWALLATENFTHMISGSRDKRIVMTELSHPDRYTVICEEKAPILKMA
MIPDQSSIWVATSESTINNWSISQKDWQELGIGDYCDSASNMSNNILRNTEPTQKILGAP
AIRHYHILNDKRYILTKDTEENVALFDVLKACKVEDLGKVDFEQECKKRNKLVYVPNWFN
VDLKTGMLTIHLGQDENDCFSAWVSAKEAGLAENDAVDQKVNYGNLLLQALLEHWWRPLH
ADDENEGNGNDENGPMHTKGGNPYFSVPSHTPVIFSEVGGRTVYRLLVRDAAGETEGVLL
TETVPPWVVNIVVNKNLPSFIKIPFYLLPHSSSGVKSLKKDRLIANDFIQVRKVAEHVYD
KVLGAGSDSGSVAGGGNTVSSGSPAGDRTNTDSNTDNSSLAEEKVELLCNDQVLDPSMDL
RTVRHFIWKSSADLTLHYRPVK
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggcagcgcacaagacggttgggcagaatgctcgtaaaaaaatacaggtgtctatggtt
ataagagatgaggtggagaagcagcacagagctggcattaattcgttgcaatacgatcca
ggtctgcatagactatattctgctgggagagacagcattataaggatatggaattgtaga
aatatcaaagatccatatatccagtcaatggaacatcacacagattgggtcaatgatata
gttttgtgttgtaatggcaaaaatattatatccgcaagttctgatacaaccgttaaggtg
tggaatgcgcataaaggtttttgtatgtccacattgcgcactcacaaagactatgtcaaa
gcgttggcatacgccaaagacagagagcaagtcgctagtgctggcctggataagtcaata
tttctctgggacgttaatacactaaccgctcttactgctagtaataacacggtgacgacg
tcgtcactgaacggaaacagagactcgatatacagtctggcgatgaaccaaagtggcaca
attgtagtgagcggcagcacggaaaaagttctccgagtatgggatccgcgatattgtagt
aaacttatgaaacttcgtggacacacggacaatattaaagcgttagtcctgaacaaggac
ggtactcagtgtttgtccgcgagttccgatggcactatcaaattgtggtctctcggccag
caaagatgtgtacagactttccgagttcacaaggaaggcgtatgggctttattggcaact
gagaactttacacacatgatatctggcagtagggacaaaagaatagtaatgacagaattg
agccatcctgacagatatacagttatctgtgaagaaaaggcacctatactcaagatggct
atgataccggatcaatccagtatttgggttgcaaccagcgaatcaactatcaataactgg
tctataagtcaaaaggattggcaggagttaggaattggcgattattgcgattcggccagt
aatatgtcaaataacatcttaaggaatactgaacctacacaaaaaatactaggcgctccc
gctataagacactatcacatattgaacgacaagcgatacattttgacgaaggacacagag
gaaaatgttgccttgttcgatgtactaaaggcgtgtaaagtggaggatttaggtaaagtc
gatttcgaacaggaatgtaaaaagagaaataaactagtttacgttccaaactggttcaac
gttgatctcaaaacggggatgttaactatacacttaggacaagacgaaaatgattgtttc
tctgcatgggtctctgccaaggaggccggtctggcggaaaatgatgctgtagatcagaaa
gtgaattatggaaacctcttattgcaagcgttgctcgagcactggtggagaccgctccac
gccgacgacgaaaatgaaggcaatggcaacgatgaaaacggtcctatgcacacgaaagga
gggaatccatacttttcagtacctagtcacacaccagtcattttcagcgaagtgggaggc
agaactgtttaccgattgttggttcgagatgccgcgggtgaaaccgagggtgttctgctg
accgagacggtacctccatgggtggtaaatattgtcgtcaacaaaaatcttccatcattc
ataaaaataccattctatcttcttccacattcgtcttcgggcgtaaagagtttgaaaaag
gatcggttgatcgcgaacgattttatacaagtgcgtaaagtggcggaacacgtttacgac
aaggtgcttggcgcgggaagcgattcgggttccgtagccggaggtgggaatacagtttct
agcggatctccagcgggtgacaggacgaacacggattccaacactgataattcctcattg
gccgaggaaaaggtcgaactcctatgtaacgatcaggttttggatccttcgatggatctg
agaacagttagacattttatctggaaaagttcggcggatttaacacttcattatcgccct
gttaaatag

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