Pseudomyrmex gracilis (graceful twig ant): 109852148
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Entry
109852148 CDS
T05003
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04519
Cadherin signaling
pgc04620
Toll-like receptor signaling pathway
pgc04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109852148
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109852148
04624 Toll and Imd signaling pathway
109852148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgc03000
]
109852148
Transcription factors [BR:
pgc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109852148
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
RHD_DNA_bind
RHD_dimer
Ank_3
Ank_4
Ank_5
Ank_KRIT1
WASH-7_mid
RRM_9
Motif
Other DBs
NCBI-GeneID:
109852148
NCBI-ProteinID:
XP_020278618
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MPDAYENFNMAMRSMLTASDIADNEDPYLPSNDVFNMNTLSPFSGSQGNMSASSPSTSLS
PEYFSPDDYFTNLNSTPVLGEPYIKILVQPIEKFRFRYKSEMVGTHGSLTGVSSLTGRRN
KCVPTVQLCNFADNAIIRCTLATSDDYNRMIHAHRLVRRENNEDVDDPHEVKVSRHDNHR
AEFTNMGIIHTARKHIKDEIVRKLCAEQLEERRRLNKNASLNLCDEAKIKINAEHYQRIM
NLNSVALRFQAFIKDEFDIMRPITQPVYSHPINNLKSALTGELKICRIDKYTSSCEGGEE
VFIFVEKVAKKNIKIRFFEVDEESGVEVWSDYARFSELDVHHQYAMVFRTPPYKDLTITS
PKDVFIQLERPSDSQCSNAIKFVYKPSDRMMGRKRTRVSDSNSEELARMAISNQNAPSMT
TTSEAVLPNTNAPLPSTSSNNSEQNSNLSQDLLELLEEKCPSTEFRAFMNNMNSDEFLPL
YTDCLQQSGTLICDGAHSKTPNVIYEDDDKLFANKILCNAIRDIQKKSGKTKDIIVNLFK
DRTTYGDTPLHCALRYGQKETAKNILKLMSVLKSDAAELINIQNSSGKTPLHYAVTQIHP
EITKALLMLGADPNVADHCGQMPLHKAVKCSEARANIDILLNERTVNIEANTDLGWTPLQ
LAAQAGSFHAVQALVKAGADVNSTDMSYGRTALHVAVEGGHNDIVKFLLENTKIDVNKRN
FSGNTALHTAVVTPGSKAKQICALLLKHGADPHIKNYHHEPEAPNVEEDEENIVTKIKIE
EEDLDYKNVEEHSGQSSFDLASNKPDILQLVSESDAFLKEEVQCKEEDINDTEKVWMDVQ
QEVQLANILDKTEGWKKLVQHFNFDDFIRKTIEQSSISPSMLLLNYIGIQTNTSLSELRN
ILEIVGEREAAAFMAFKKMLSYV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgccagatgcgtacgagaactttaacatggcgatgcgaagcatgctgacagccagcgat
atcgcggataacgaggatccgtacctcccgtctaacgatgtatttaatatgaatacccta
agcccatttagcggatctcaaggaaatatgagcgcttcatctccatcaacatctctgtca
ccagaatacttttctccagatgattattttactaatttaaacagtaccccagtacttggc
gaaccgtacattaagattttggtacagccaatagaaaagttcagattccgatataaatcc
gagatggtaggaacacatggaagcctgacgggtgtttcgtctctgacaggtagacgaaac
aagtgtgtgcctacagtgcagttatgtaattttgcggataacgcaataatacgatgtaca
ttagctacgtctgatgattacaacagaatgatacatgctcacagattagtgagacgagaa
aataacgaagatgttgacgatccacacgaagtaaaagtttcgcgacacgataaccataga
gccgaattcacaaacatgggcataatacacactgcgagaaaacacattaaagacgaaata
gttcggaagttgtgtgcggagcagttggaagaacgtagacggcttaacaaaaacgcttct
ctcaacttgtgtgatgaagcaaaaattaaaatcaatgcggaacattatcagaggatcatg
aacttaaatagcgtagctctccgttttcaagcattcataaaagatgaatttgacatcatg
agaccgatcacacaaccagtttacagccacccaatcaataatctgaaaagcgcgttgact
ggggaattaaaaatatgtagaattgataaatacaccagcagctgcgaaggtggggaagaa
gtgttcatatttgtagaaaaagtcgctaaaaaaaatataaaaatcagattttttgaagtg
gatgaggaaagtggagttgaagtttggtctgattatgctcgtttctcagaacttgatgtt
catcatcagtacgctatggttttccgaactccaccctataaagatctaacgatcacgtct
ccgaaagacgtctttattcaactggaacgtccttcggattcacagtgttcgaacgcaatc
aagtttgtatacaaacctagtgaccgcatgatgggtaggaagagaacgagagtttctgac
tcaaatagtgaggaattggcacggatggcaattagtaatcagaatgcaccgtcgatgact
actacttcagaagcggtattaccgaatacaaacgcaccgctacctagtacgtcttcaaat
aacagcgaacaaaatagtaatttatctcaagatttgctcgagttgttagaagaaaaatgt
ccttctactgagtttcgggcgtttatgaacaatatgaattcagacgagttcttaccactc
tatacagactgcttacaacaaagcggaactctaatttgtgacggagcacacagtaaaaca
ccaaatgttatttatgaggacgacgataaactatttgctaataagattctgtgcaatgca
ataagagatattcagaaaaaatcaggaaaaacaaaagatattatagtcaacttattcaaa
gaccgaacaacttacggagatacgcctctacactgtgccctaagatatggacaaaaagaa
accgcaaagaatatcctgaagctcatgagcgttttgaagtcagacgctgccgaattgata
aacatacaaaacagttctggaaagactccgttgcattatgccgttacgcaaatccatccg
gaaattacgaaagcgttactgatgcttggcgctgatccgaatgtagcagatcattgtgga
caaatgccgctacacaaagctgtaaagtgttcagaagcaagagcaaacatcgatattttg
ttaaatgaaagaacagttaacattgaagcgaacacggatttagggtggacaccgttgcag
ttagccgctcaagcgggctcgtttcacgcagtgcaggctctcgttaaagcgggcgcagat
gtcaacagtaccgatatgtcttacggaagaactgctttgcacgtggcggtcgaaggtggc
cacaacgacatagtgaaattcctattggaaaacaccaagatagacgtgaacaagcgaaac
ttcagcggcaacacagcgttgcacactgccgtggttacgccaggatcgaaagctaaacaa
atctgtgctcttctactgaaacacggtgccgatccacatataaagaattatcatcacgaa
ccggaagcaccaaacgtcgaagaagacgaagagaatatagtaacaaaaataaaaattgaa
gaagaggatttggattataaaaatgtagaagaacatagcggacaatcgtcgttcgacttg
gcatccaacaaaccagatatcttgcagctcgtttctgaaagtgatgcattcttaaaagaa
gaagtgcaatgtaaagaagaagatataaatgatacagaaaaagtttggatggatgtgcaa
caagaagtgcagttagcaaacatattggacaagacagaaggatggaaaaaattggtccag
catttcaactttgatgattttataagaaaaactattgaacagagctcgatcagtccgtcg
atgcttcttttgaattatattggtatacaaaccaatacttctctcagcgagcttcgcaac
atattagaaattgttggcgaaagagaagctgctgcattcatggcttttaaaaaaatgtta
agttatgtataa
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