Pseudomyrmex gracilis (graceful twig ant): 109852284
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Entry
109852284 CDS
T05003
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109852284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109852284
Enzymes [BR:
pgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109852284
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
109852284
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
109852284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
HHH_3
NTP_transf_2
Cdd1
DUF4332
HHH_RS2-RL21-YNQ2
Autophagy_act_C
HHH_2
DsrD
DUF6602
Motif
Other DBs
NCBI-GeneID:
109852284
NCBI-ProteinID:
XP_020278896
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MGKRKAATSANNPNQDLCDFLTELADYERNVSKNVYKYNAYRKAAGTLSALPERVKSGEE
AKKLPGIGVKIAKKIDEFLQTGKLQKLEDIKKDENNVAISLLARVSGIGPAKAKELVDAG
IKTLEELKKHQNKLTHHQKLGLRYFDDFEKKIPRAEIKQIEKILKNVIKELDNDYLITIC
GSYRRGKEESGDIDVLITHPNYISTSKKKTVSLKAIVACFEKKRLITDTLSLGSSKFMGV
CQLSKDKPFRRLDIRLTYHDQYYCAVLYFTGSDLFNQNMRAHALEKKYTLNEYTLKPLTA
KDCPGDPVQITCEEDIFKILGLPYKEPKDRNV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaagccgcgactagcgcaaacaatccaaatcaagatttgtgtgacttt
ttgacggaattggctgattacgaacgaaatgtcagcaagaatgtttacaaatacaacgcg
tatcgcaaagcagctggaacgttaagtgctctgcctgagagagtcaaaagtggagaggaa
gcaaagaaattgcctggaattggagtaaaaattgcaaagaagatagacgaatttcttcaa
acagggaaactgcaaaaattagaagatattaaaaaagatgaaaataatgttgccataagt
ttgttggccagagtatcgggcataggtcctgcaaaagcaaaggaattagtagatgctggc
atcaagacattggaagaactcaagaaacatcagaacaagctcacacatcatcaaaaactt
ggattacggtacttcgatgattttgagaaaaaaatacccagagcagaaattaaacaaatc
gagaagatattgaagaatgtcataaaagaattggacaatgattatctcataaccatctgt
gggagttacagacgtggcaaagaagaaagtggagatattgatgttctcataacacatcct
aattatatatcgacatctaagaaaaaaactgtatcattgaaagcaattgttgcctgtttt
gaaaagaaacggttgattacagacacactctctcttggaagcagtaaatttatgggagta
tgtcaattgtcgaaggataaacctttcagaaggttggacatacgtctcacatatcacgat
caatattactgcgctgtactttatttcacgggaagtgatctgttcaatcagaatatgaga
gcacatgcattggagaagaaatacactctgaatgaatacacactgaaacctcttacagca
aaagattgtccgggagaccctgtacaaattacgtgtgaagaagatatttttaagatcttg
ggtttgccgtacaaagagccaaaagatagaaatgtttaa
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