Pseudomyrmex gracilis (graceful twig ant): 109852373
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Entry
109852373 CDS
T05003
Name
(RefSeq) uncharacterized protein LOC109852373
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109852373
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109852373
Spliceosome [BR:
pgc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
109852373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_RecD
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
109852373
NCBI-ProteinID:
XP_020279062
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MALYTAHDLSKKQRTRDIKIQENVTFCQMGLSQKISDGLITAGFQLPSPIQLKAIPLGRI
GFDLIVRAKSGTGKTVVFGIIALEMINTHISSPQVLIIAPTREIAIQISEVIKTIGSKIE
GLKVEYFVGGISVEEDKRKLNACHIAVGAPGRIRHLIEKRFLKVSTVRLFVLDEADKLME
INFQRDINFIFSKLPTNKQIIASSATYPGDLETFLKTYMSSPVLTSPDLDGPILLGIKQF
VIVVSEHPNAMKQVKIKMDELVKIFTNIAFKQCLVFSNYQSRAQSVSNNINSMGFSSSYI
SAHQDMNKRLEAIEKLRNFECRIMLTTDLTARGIDVENINMVVNLDLPIDATTYLHRIGR
AGRYGSHGVSFTIVSKRELSLFKQLLTSIGGPNFYVFKLNNYESDVWANDTEMFEKVYSR
DTSETSNNNKLSDIDKTVLESKHGAPMTIPVSELISDTVSDNNIAEASIAKHNVCHCVSE
SASSSESNVTNNITSNSECANMLPKALISNRTSSLRNMNFTIMENDSSSDSMTHIRNNKK
DRKITNVDKKIKISSLLECFVKEKIRNKSADTCERDKNIPTDLSEATSTNRTDESFPMKK
LNEDITFDVDLSCINDRKLSNVEIENIIQCVKAPLLGEKEESNVSTSVPEFVSASDNSKL
IVQTPSEDVICSLELSMEKLDSKDNKMSKELNDYLVMYAKEMKEIGNDSHTNDEESLLKI
ASNWKEQLDLEISLLDDTSMTESVHKLAYEEYFSALKTFLDIQKRAFLCIFPQLRSDEEV
QKTYTYSACNSDNNLLDMYREIEDFKSRFSKMGTKFNAYFPYPISIDERMPNLMMSNSEI
EEYRKALQHLSTYQDPSEKLREIIDYIAFLSESERRDLIQKIKDEKLSFSNMKALLIEEA
TKRNRKNKLTDAVPETHIADEKNSKKDEVSEISSDEITVYQDKIENTNCNTPDLNTILIE
NQNNENLLNKEDSNSIKKVYANRQEDEGDDEHISTPSESSFVFPEMENIINPIANKTIFN
NQQEVTSRNSCRKDNKKNAFFKIEVPTSFKPVQTNNVVYNSMEEWHRKYSKPVKSLKNNS
KSKATANNSTTSAKYSRAQSDVRVTANTKRSAPITSTVPSSSLQTSHNLSYYSITEEGAC
PSSQIDDYFNQNSYMPTWIQVSSANESETSQSNRTSQHTAPKTKRRSKTSKVPRIDESET
DKVHEADIEKFLSSLRTQTERLHLQIYQSQMFENWPRYS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggctctctacaccgcacatgacttaagcaagaaacaacgaacgcgagatataaaaata
caagaaaatgtcacgttttgtcaaatgggcctttcgcaaaagatctcggatgggttgatc
actgctggatttcagctaccatctcccatacagttaaaagctattcccctgggccgtatt
gggtttgatttaatagtacgtgccaaatcaggaactggaaagactgtggtatttggtata
atagcacttgaaatgataaacactcatatatcatctccacaagtgttaataatagcacct
actagagagattgctattcaaatatctgaggttattaagacaataggttcaaaaatagaa
ggattgaaagttgaatattttgttggtggaatatcagtagaagaggacaagagaaagttg
aatgcatgtcatatagctgttggtgctccgggcagaattaggcatttaattgaaaaaaga
tttctcaaagtttcgacagtcagattattcgttcttgatgaagcggataagttaatggaa
ataaattttcagagagatattaattttatattttctaaactaccaaccaataaacaaatt
atagcctcaagcgctacttatccaggagatttggaaacatttttaaaaacatacatgtcc
tcaccagtgttaacatcgcccgatcttgatggaccgatcttgttagggatcaaacaattt
gtaattgttgtttctgaacatcctaatgccatgaaacaggtaaaaataaagatggatgag
ctggtgaaaatatttactaatattgcatttaaacagtgcttggtcttttcaaattatcag
tcacgagctcagtcagtaagcaataacattaactctatgggattttcatcttcatacatt
tctgcacatcaagacatgaataaacgattggaagcaattgagaaattgaggaacttcgaa
tgtagaattatgctgaccacagacttgaccgcaaggggtatagatgtagaaaatatcaac
atggtcgtgaacttagatttacctatagatgcgacgacatatctacatagaatcggcaga
gccggacgctatggttctcatggggtctcttttactattgtttccaaaagggaactgtca
ttgttcaaacaattgttaacttcaattggtggaccaaacttttatgtattcaaactcaat
aattacgaaagtgatgtttgggctaacgatactgagatgtttgaaaaagtttattcgaga
gatacgtccgagacaagcaacaataacaagctttcggatatcgataaaacggttcttgaa
tctaaacacggcgcacctatgacaatacctgtttcagaattaatcagtgatacagtatcc
gataataatattgccgaagcttccattgcaaaacataacgtgtgtcactgcgtgagcgaa
agcgcgtcatcatcagaaagtaacgtaaccaataacatcacgagtaatagcgaatgcgcg
aatatgttgccaaaggctttgataagcaatcgcacgtcatcattgaggaatatgaatttt
actatcatggaaaatgactcatcatcagacagtatgactcacataaggaataacaagaaa
gatagaaaaataactaatgtagataaaaagataaagattagttcgttacttgaatgtttt
gttaaagaaaaaattagaaacaaatctgctgatacttgcgagagagataaaaacatacct
acagacttgtccgaagctacttccactaatcgtacggatgagtctttccctatgaaaaaa
ttgaatgaagatattacgttcgatgtggatctctcgtgtataaacgatcgtaaactgtca
aatgtcgaaatagaaaatattattcaatgcgtaaaggcgcctttgctcggtgaaaaagaa
gaaagtaatgtatcaacttctgtgccagagtttgttagtgcgagtgacaactcgaaactt
attgtacaaacaccgtctgaagatgtaatatgcagtttggaattgtctatggaaaaattg
gactccaaagataataaaatgtcgaaggaattaaacgattacttagtaatgtacgccaag
gaaatgaaggaaattggcaatgactctcatacaaatgatgaagaatctttgctgaaaata
gcttccaattggaaagaacaacttgatcttgaaatcagcttattagatgacacgagcatg
accgagtccgttcataaattagcgtacgaagaatatttttctgccttgaaaactttcctc
gatatacaaaaacgggctttcttatgtatttttccgcaacttcgcagcgacgaggaagtg
caaaaaacttatacgtattcggcgtgcaattcggataacaacctgttagacatgtacagg
gaaatagaagacttcaagagtcgcttctctaagatgggaaccaaatttaacgcgtacttt
ccgtatcctataagtatcgacgagcgtatgcccaatttaatgatgtcgaattccgagatc
gaggaataccgcaaagctctgcagcatttgagcacgtatcaggatcctagcgagaaatta
cgggaaattatagattacatagcatttttgagtgaaagcgaaagacgcgatttaattcag
aagataaaagatgaaaagttgtctttttcgaatatgaaggcacttcttattgaggaagca
acgaaaaggaaccgtaagaacaaattaacggatgctgtgccggaaacacatatagccgat
gaaaagaattcaaaaaaggacgaagtaagcgagatttcttccgatgaaattacagtctat
caagacaagatagaaaatacgaactgcaacactcctgatctcaatacaatcttaattgaa
aatcaaaataatgaaaaccttttaaacaaagaagattcaaacagtattaaaaaggtttac
gcgaatagacaagaggacgaaggagatgatgaacatataagtacgccgagcgagtcgtcc
tttgtatttcccgaaatggagaatattataaacccgattgctaataaaactatatttaac
aatcagcaagaggtaacgtctagaaatagctgcagaaaggataacaaaaaaaatgcattt
ttcaaaatagaagttccaactagttttaaacctgtacagacaaataacgttgtttacaac
agtatggaggagtggcataggaaatatagtaaacctgtgaaatctcttaaaaacaattcg
aaatccaaagccactgcaaataactcaactacatctgcaaaatactcgagagcacaatca
gacgtacgtgtaaccgcaaatacgaagagaagcgctccgataacttcaacagtgccaagc
tcttctttacaaacttcacacaatttaagctactattcgatcacagaagagggagcgtgc
ccatctagtcagattgatgattattttaatcagaactcgtacatgcctacttggatccaa
gtttcatccgcaaatgaaagcgaaacgtcacagtccaatcgtacatcgcaacatacggca
cccaaaaccaaacgtcgttctaaaacttcaaaagttccgaggatagacgagagcgaaacg
gataaagttcacgaggcggatattgagaaatttctatcgtctttgagaactcaaacagag
cggttgcatcttcagatctatcagtcacaaatgtttgagaattggcctcggtacagttag
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integrated database retrieval system
