KEGG   Pseudomyrmex gracilis (graceful twig ant): 109852833
Entry
109852833         CDS       T05003                                 
Name
(RefSeq) nucleoporin seh1-A isoform X1
  KO
K14299  nucleoporin SEH1
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013  Nucleocytoplasmic transport
pgc04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109852833
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    109852833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109852833
   04131 Membrane trafficking [BR:pgc04131]
    109852833
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109852833
Membrane trafficking [BR:pgc04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    109852833
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 109852833
NCBI-ProteinID: XP_020279949
LinkDB
Position
Unknown
AA seq 405 aa
MFEAHTINAEHKDLIHDIAYDYYGERMATCSSDHFVKVWDEDEHGNWHLTASWKAHSGSV
WKVTWAHPECGQVLATCSFDRTAAVWEEIVGEGSGPEARGSKHWIKRTTLVDSRTSVTDV
KFAPKTLGLLLATCSADGYIRIYEAPDIMNLSQWTLQHDINCKLSCSSLSWNPSLSRLHP
PMIAVGSDDPNPSLGAKVFIYEFSESSRRWVKVEALSSVLDAVYDIAFAPNLGRNFHTLA
IATKDVRIITLKPTQESTQTGVSHFEINTVAQFDDHYCTVWRVSWNFMGTILASAGDDGC
IRLWKDNYINEWKCVSVLKGDGAPAQNTETPVLATPPSSSTPAQQAPSTTRAVSIATIAA
EKPATNVVSSNKWQPPVIKGRFSKSVWLGNPSEPTPPPPPIITRK
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgttcgaggcgcacactatcaatgcagagcacaaagatcttatacacgatatcgcttat
gattactatggagaacgaatggcaacgtgttccagtgatcattttgttaaggtgtgggat
gaagacgaacatggaaattggcacttgactgcttcttggaaggcacatagtggctcggta
tggaaggtcacatgggcgcatccagaatgtggccaagttcttgctacatgttcctttgat
cggactgctgctgtttgggaggaaatcgttggtgaaggctctggaccagaagctcgtggt
agcaagcactggattaaaagaacaactttagtagattctcgtacttcagtcacagatgta
aagtttgcaccaaagactttaggtcttttactggccacttgtagcgcagatggctatatt
cgaatatacgaagcacctgatattatgaatttgagtcaatggactctgcaacacgatatc
aattgcaagctttcgtgtagtagtctttcttggaatccatcgctttcaaggttacatccg
cctatgatagcagttggtagcgacgatcccaatccatcactcggagcaaaggtgttcatt
tacgaattttctgagagcagtagacgctgggttaaagtcgaggcgttatcgtctgttcta
gacgccgtttatgacattgcgtttgctcccaatttgggcagaaattttcacactttagcc
atagccacaaaagacgtacgaataattactctgaagccgacgcaggaaagtacgcaaacc
ggtgtttcccatttcgaaataaacacagttgcgcaattcgacgatcattattgtactgtc
tggcgtgttagttggaactttatgggaacgattttagcaagtgccggcgacgatggttgc
atccgtttgtggaaggataattatattaatgagtggaagtgcgtctccgttcttaaaggg
gacggcgcacccgcgcagaacaccgagactcccgttctggcaactccaccgagttcgtcc
acaccggcgcaacaagcgccgtctaccaccagggccgtaagtatagcaacgatcgcggca
gagaaaccggctactaacgtcgtaagcagtaataagtggcaacctcccgttataaagggc
cgctttagtaaatctgtgtggctcggtaatcccagcgaaccaactccaccaccacctccc
atcataacaaggaaataa

DBGET integrated database retrieval system