Pseudomyrmex gracilis (graceful twig ant): 109853075
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Entry
109853075 CDS
T05003
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04140
Autophagy - animal
pgc04142
Lysosome biogenesis
pgc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109853075
04140 Autophagy - animal
109853075
04148 Efferocytosis
109853075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgc04131
]
109853075
Membrane trafficking [BR:
pgc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109853075
Hops complex
109853075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3H2C3
Beta-prop_EML_2
zf-C3HC4
zf-RING-like
Beta-prop_WDR36-Utp21_1st
zf-RING_5
TPR_11
PSII_Pbs27
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
109853075
NCBI-ProteinID:
XP_020280407
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MAFLEWRRFNFFDLKKEVDAGKIAKAFGDAQVAAATSGNGNLVIGDNTGGVHLVNRTYEV
TTFRAYEIALVLAQQVQHSTFLFTIGEDEPGCNPTIKVWNLAKLDKQGNPTCVRISRAIP
SYRAVPATALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVLKDANLSITGLAIRA
TGKQTHLFVATQNNVFLYNITVKDKEFKSTLDTMGCARKCSVLAESMPDSHFMIGRSDAI
YCYTPDGRGPCYAVEGQKIMLEWFRTYLVIVAKEAANVPRTTTTISSKPNTIESIPPGVD
KHTITVLDIQNKFIVFSASMVSVQAVLSEWGGFFILSGDNKLYHLDEKDLQSKLALLFKK
NLYDVSIRIAKNQQYDAEGLIDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKF
LDSQHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVEI
AIKVCRQASPDDALLLAQKHNKHEWYLRIQIEDNREYKKALEYMATLEFEEAEANMKKYG
NILIENVPNESTQFLKALCTNYKPSNKPLVDQDALNGYTEQQIDKANPEDFIHLFLNNSE
RLVEFLEHLVKSDTKWSTLVYNTLVEHYLHVWSALNSDVARVQYEQKIVRLLQNSEARYD
KDQILILCHQHNFRKGLLFLYEENKLYQEILRFHLREGDSEQVLATCKRFGHQDPNLWVQ
ALWSVAKNKDAPTKLLADILAYIAQERLLSPLMVIDAISTSLTCTLGDVRSYLCSVLRTE
NEQTQADADLTEKYRADTLKLREQIEAIKNSTIIFQGSRCSACHHQLELPSVHFMCQHSY
HQHCFQSFSENENECPACLPNNKKLLDIIRAQEQSRDLHETFHSLLDRAEDPFSLVADYF
GRGVFKKLTVITDSDKSLLTPTKFEEPKLNYGPGAEARLRLNEGKSSISGKADPRRAGYD
VPTLITEERYRGFAKSDVYSSSLEANITGSGLSTPRGNSAKASPVPIREARILNSTTPKS
SPIEKPFVPPKTPIVPSNPFEDDYDESKNPFANDDDDDDATNPFKDDDNDGAGDDDYNRN
LNPFGR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctggagtggagacgcttcaattttttcgacctgaagaaggaggttgacgcg
gggaagatcgccaaagcattcggagatgcgcaagttgcggcggccaccagtggcaacggc
aacttggtcatcggggataacacgggtggcgtacacttggtgaacaggacgtacgaggtc
acgacttttcgggcttacgagatcgcgctggtgctggcacagcaagtgcaacattccact
tttctcttcactattggcgaagacgagcctggttgcaatcctaccataaaggtttggaat
ttggctaaacttgacaagcaaggcaatccaacctgtgtacgaataagcagagccataccc
agttacagagcagtgccggcgactgctctgtgtgttcacactagtctcaccttgatggcc
attgggtttggagacggttctatcatgttgtacagaggggatctgactcgggagagaaag
aataagataaaagttctgaaggacgccaatctgtcgattactggcctcgctataagagcg
accggcaaacagacacatctgtttgtcgccacccaaaacaacgtgtttttatataatatt
accgttaaggataaggaatttaaatcgactctggataccatgggctgtgctcggaagtgc
agcgtgctcgcggaatccatgccggacagccattttatgatcggacgtagcgacgctatt
tattgttacacgccagacggtagagggccgtgttatgctgtagagggtcaaaagataatg
ctggaatggtttagaacgtacttggtgatagtagcaaaggaagcggcgaatgttccaaga
acaacgaccactatatcgtccaaaccgaacacaatagaatcgatacctccgggtgtggac
aagcacaccatcaccgtgctcgacatacaaaacaaattcatcgtgttctctgcgtcgatg
gtgtctgtccaagcggttctgtccgagtggggtggatttttcatactcagcggggacaac
aaattgtatcacttggacgagaaggacctgcagtctaaattagcgttgctgttcaaaaag
aatttgtacgacgtttctataagaatagctaagaatcagcaatacgacgcggagggtctc
atagacattttccgtcaatacggagaccacctgtactccaagggagatcacaacggcgcc
atagaacaatacataaaaacgataggcaagttggagccgtcttacgtgataagaaagttc
ttggattctcaacatatcgacaatttgacgacgtatttgcaagcgttgcataaaaatggt
caggcgactgaggatcacacaaccttgttgttaaactgttacaccaaactcaatcatact
gacaaactcaaagaattcatcatgacaaaagatcgcgaggttgactttgacgtagaaata
gcaataaaagtttgccgtcaagcgtctccggacgatgctctgctactcgcgcagaaacac
aacaaacacgagtggtatcttcgtattcaaatcgaagacaatcgggagtacaaaaaggcg
ctggaatacatggcaacattagaatttgaagaggcggaagctaatatgaagaaatatgga
aatattttaatagaaaatgtgccaaacgagtcaacgcagtttttgaaagctttgtgcaca
aattacaaaccttcgaataagcctcttgtcgatcaggacgcgttaaatggctacacggaa
cagcaaattgataaagccaatcctgaggattttattcacctgtttttaaataattccgag
cgactcgtggagttcctggagcacttagttaaatcggatacaaaatggagtacgcttgtg
tacaacacattagtcgaacattatttgcacgtctggtcggctctgaacagtgacgttgct
agggtgcaatatgaacaaaagatcgtgcggcttctgcagaattccgaagcgcgttacgac
aaagaccaaatattaatactttgtcatcagcataatttcagaaaaggattgctctttctt
tacgaagagaacaaattatatcaggagatattgaggtttcacctgcgcgagggagacagc
gagcaagttctggccacgtgcaagaggttcggccatcaagatcccaatttgtgggtgcaa
gctctatggagcgtggctaagaacaaggacgcgccaacgaaacttctcgctgacatattg
gcttatatcgctcaagaaagactgttgtcccctttgatggttatcgatgcgatttccacg
tcgttgacctgtacgttgggtgacgttaggagttacttgtgtagcgtgttgcgaacggag
aacgagcaaacccaagcggacgccgatctaacggaaaaatacagagccgacactttgaaa
ttacgagaacaaatagaagcgataaaaaacagcacgataatctttcagggatcgcgctgt
agcgcgtgccatcatcaattggagttaccgtcggtgcatttcatgtgtcaacattcgtat
catcaacattgctttcaaagtttttcggaaaatgaaaacgagtgcccggcgtgcctgccg
aacaacaagaaacttcttgacatcatacgagcgcaggagcagtcgagagatctgcacgag
acgtttcacagtcttctcgaccgcgcggaagatccattttctttggtagccgattatttc
ggcagaggcgttttcaagaaactgaccgtaatcaccgattcggacaagtcgttgctcacg
ccgaccaagttcgaagagcccaagttaaattatggcccgggtgcggaagcgaggctcagg
ttgaacgaagggaagagttcgatctcaggaaaagcggatcctcgacgagctggatacgac
gttcccacgttgataacggaagagcgttaccgaggttttgccaagtcggacgtgtattcc
tcgtcgttggaagcaaacataacggggagtggcttgtcgacgccgcgaggcaattccgcg
aaggcttcgccggtgccaatcagagaggctcgtattttgaacagcaccacgccaaaatcg
tcaccgatcgaaaagcctttcgtcccaccaaagaccccgatcgtaccgtcgaatcccttc
gaagacgattacgacgaatctaagaatcctttcgccaacgacgatgatgacgacgacgcg
accaatccttttaaagatgatgacaacgacggggctggcgatgacgattacaatagaaat
ctaaatccgttcggcagataa
DBGET
integrated database retrieval system
