Pseudomyrmex gracilis (graceful twig ant): 109853205
Help
Entry
109853205 CDS
T05003
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109853205
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109853205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
DUF3439
UBA_N4BP1_C
zf-CCCH_2
zf_CCCH_4
zf-CCCH
RuvA_C
Mucin
Motif
Other DBs
NCBI-GeneID:
109853205
NCBI-ProteinID:
XP_020280676
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MTVAGKRYVDCTVLGANSMPDAEDSSYDSDYEAEDATATTATATTTTTTMTTTTTTTMSV
TRRPRSTESSQVSHPAAHSDVSRTTSDTLAAEFAEYVTIQGPSPTQSPGYIARVEFALKL
GYTERLVQAALQKLGPDPGQNELLAELIKLGATCSPKFNDSSEEQDGALDADAGTDRSGE
SILASTMTAATTTTTTTTTMTTNTITSIDLRPVVIDGSNVAMSHGNKEVFSCRGIKICVD
WFRARGHKEITVFVPKWRKEASRPDNPVVDQEILSELERDRLLVFTPSRLVGGKRMVCYD
DRYILKLAAEVDGIVVSNDNYRDLAQENPEFRRVVEERILMYSFVNDRFMPPDDPLGRSG
PTLENFLRTTPRRVDPAPPCPYAKKCTYGNKCKFRHPERGSHPHKSVTERLVEHAQRHLQ
ARGPSLSLPLPSTNVSVSSQHPPLCKARSSVPPSVVSSLSSVPKSKSVENVTSDLPVTSP
AIYSQQMTSTQNPEVNWTMSRVNNSEPEPGNMHRKLQRQLTLNPSCDPRLYRLRRYQQPQ
QRVSQPPQQQQQSSAVASSRSNMQHRPLTRHTSNESSYPVTAISWDHPDHLQHHHQHVTR
IASAPDSYMAWPPHGTAVMPPSRVQRLGTSDPQLNLLPASSQSANLHIPWGTQVQDARRR
LHYHLANIFPEEQVQTVMALHPHETDPQQICAAILAMFPKN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgctggaaagagatacgtggactgtacagttctaggagcaaatagcatgccg
gacgcggaggactcgtcatacgacagcgactacgaggccgaggacgcgacagcgaccacg
gcgacggcaacaacgacgacaacgacgatgacaacaacaacaacaacgacgatgtcggtg
acgcgacgtccgcgttctacggaatcatcgcaggtgtcacatccggcggcacattcggac
gtgtctcgcactacctccgacactttggcggccgagttcgccgagtacgtcaccatccag
ggaccgtcccctacgcagagtccaggttacatcgctcgcgtggaattcgctttgaagctg
ggctacaccgaaagattggtacaggcggctctacagaagctcggaccagatccgggtcag
aacgagctgttggccgagctgatcaagctcggagcgacctgttctccgaaattcaacgac
agttccgaagaacaggacggcgcattggacgctgacgcgggcacggacaggagcggggag
tcgatcttggcgtcgacgatgacggcggcgacgacaacgaccacgacgacaacgacgatg
acgacgaacacaatcacgtcgattgatttgaggcccgttgtcatcgacggcagcaacgtc
gccatgagccacggcaacaaggaggtgttttcctgtcgcggtatcaagatctgcgtcgac
tggttccgcgccagaggtcacaaggagatcaccgttttcgtgcccaagtggcgaaaagaa
gcttctagaccggacaatccggtcgtcgatcaggaaatactgagcgaactcgagagagac
cgcttgctggtgtttacaccatccagattggtgggcgggaagcggatggtgtgctacgac
gaccgatatattctgaagctggccgcggaggtcgacggtattgtcgtcagcaacgataac
tatcgggatctggcgcaggagaatccggaattcagacgagtggtcgaggagagaattctg
atgtacagtttcgtgaacgatcgattcatgccgccggacgatccgctcggaagaagcgga
cccactctggagaattttctcaggacaacaccgagaagagtcgatcccgcgcctccgtgt
ccctacgccaagaaatgcacgtacggtaacaagtgcaagttccggcatcccgagagaggt
tcgcatccgcacaaatccgtgacggaacgactggtcgagcacgcgcagcgacacttacag
gcccgcgggcccagtttgagtttgccgttaccgtccaccaacgtatcggtttcttcgcaa
catccgccattgtgcaaggccagatcgagcgtgccgccgagcgttgtttcatccttgtcg
tccgttccaaagagcaaatcggtagaaaatgttacgtcagatttacccgtaactagtccc
gccatatacagccagcaaatgacctctacacagaaccccgaagtgaactggactatgtcg
agagtcaacaattccgagccggaaccgggaaatatgcatcgtaaattgcaacgacaatta
actttgaacccgtcgtgcgatccgcggctttatcggctcagacgatatcagcagccacaa
cagcgagttagtcagccgccgcaacagcaacaacaatcgtcagccgtcgcttcttcgcgt
tccaacatgcaacaccgtccgttgacaagacacaccagcaacgagtcgtcgtatccagtc
accgccataagttgggaccatccggatcatcttcagcatcatcaccagcacgtaacgcgc
atagcttccgctccggactcttacatggcctggccgccacacggcaccgctgtcatgcca
ccgtcgcgggttcagaggctcggcacttcggatcctcagctgaatctgctgcctgcgtcg
tcgcagtccgcgaacctgcacataccctggggaacgcaggtgcaggacgcccgacgtcgc
ttgcactaccatctcgccaacatttttccggaagaacaagtgcagaccgtgatggcgctt
catccccacgaaaccgacccgcagcagatttgcgccgccattctggcaatgtttccgaaa
aattag
DBGET
integrated database retrieval system
