Pseudomyrmex gracilis (graceful twig ant): 109853252
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Entry
109853252 CDS
T05003
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109853252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgc03400
]
109853252
DNA repair and recombination proteins [BR:
pgc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109853252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
T5orf172
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
109853252
NCBI-ProteinID:
XP_020280736
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MEEEPEVVEHFFGVYLLYCLNPKYKGRTYIGYTVNPRRRIKQHNAGKKHGGAWRTSNKGP
WNMVLIVHGFPNNTSALRFEWAWQHPHESRRLKHIPKKKSSQKRFDFCLTVLSEMLKVGP
WCRLPLTVRWLDYEFSKDFHGCISPPLHMPICYGKVTSCKNKRTQRSKADDIVSKELRGE
DSLMFCSLCGSIMTERDSVSCVQPKCLLIAHLICLAKMFCKNETMILPIEGSCPACRTNV
LWGDLVRKKNGCYQTLRETSTDSSSSDSDDIL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagcccgaagtggtggagcatttcttcggcgtgtatctactctactgtttg
aatccaaaatacaaaggaagaacgtacataggttacactgtgaatccaagacgcaggatc
aagcaacacaatgctggtaaaaaacacggtggagcctggagaactagcaacaagggacca
tggaatatggtcttgattgttcacggatttcccaacaatacttctgcgctcagattcgaa
tgggcttggcagcatccgcacgagagcagacggcttaagcacataccaaagaagaaatcg
tcgcagaagaggttcgacttctgcttaacggttctttccgaaatgttgaaagttggaccc
tggtgtcgtttgccgttaacggttcgttggttggattacgaattctccaaagactttcac
ggatgcatatcgccgccactgcacatgcctatatgctacggtaaagtcaccagttgcaag
aacaagcgaacgcagagatcgaaagccgacgatatcgtttcgaaggaattgcgcggggaa
gattcgctgatgttctgttctctctgcggctcgattatgacggaaagggattctgtctcc
tgcgtgcaaccgaaatgtctcttgatcgcgcatttgatctgtctggcgaaaatgttttgc
aagaatgaaacgatgattctaccgatcgaaggtagttgtcccgcgtgcagaacgaacgtc
ctctggggagatcttgtaagaaaaaagaacgggtgctatcaaactcttcgagagacttcc
accgattcctcttccagcgatagtgacgatatattataa
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