Pseudomyrmex gracilis (graceful twig ant): 109853299
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Entry
109853299 CDS
T05003
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109853299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109853299
Spliceosome [BR:
pgc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109853299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD_LRWD1
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
109853299
NCBI-ProteinID:
XP_020280882
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MSDDEDVVYVKKQKTVHYGSLEEAERARLAAVAAETTEEEKDATNTTDVTNASALAGNVH
ISNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDFEVKKHLRQLGEPICLFGEGPA
DRRTRLRELLANIGEDAIKKKHEEEEKPSHTIEKDTETTWYHEGPESLQIARSWIATYSL
PRAKARLEKARQDLQLSAATRTAKRQELLKKLQALSIFCSQIGDTRPISFCQFSPNSKIL
ATASWSGLCKLWSVPDCTLLRILKGHSCNVGCIVFHPKATITEDVMSDSAGQTCILASCA
SDGTVKLWSGGTGEKPLAEVEGHEPYRVSRIAFHPSGRFLGTCCYDASWRLWDLEQQAEV
LHQEGHARAVHCISFQCDGSVCATGGHDSFGRIWDLRTGRCIMFMDGHLGSIFGIDFSPN
GFHIATASEDNSCKIWDLRKRACIYTIPAHTSLLSDVKYQKIEGQYLVTASYDNTAKIWS
NKTWQPLKMLPGHDGKVMSVDVSSDHKYIATSSYDRTFKLFAPE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaggatgtggtttatgtgaaaaagcagaaaactgttcattatggctca
ctggaagaagcagaacgtgcacgactcgcagctgttgctgctgaaactacagaagaagaa
aaagatgctacaaatacaacagatgttaccaatgcttctgccttggcagggaatgtacat
atctctaatgaatatatggaacttgaagatgaaatgtctaaagaccgccaggcgttgttg
gaagaatttgaacgtagaaaaaaagctagacaaattaacgtttctacagatgattttgaa
gtaaaaaagcatttgagacaattaggcgaacctatttgtctatttggtgaaggtcctgca
gacagaagaacaagattaagagaactgctggccaatattggtgaagatgctattaagaag
aagcatgaagaagaagagaaaccatctcatacaattgaaaaagatacagaaacaacttgg
tatcacgaaggtccagaatctttgcaaattgcacgatcgtggatagcaacatattcgttg
ccaagagcaaaagcaaggctagaaaaggcacgacaagacttgcagctatccgctgcaact
cgcacagcaaagagacaagaacttttaaagaagttacaagcattgagcattttttgctct
caaattggggatacaaggcccatttctttctgtcaatttagtccaaattcaaagattctt
gctacagcctcatggtcaggcttatgcaaattatggtctgtacctgattgtactttgttg
cgcattttaaaaggacactcttgtaatgtcggctgcattgtttttcatccaaaagctaca
ataactgaagatgtgatgagtgatagtgcgggacaaacttgcatattggcatcctgtgca
tcagatggtactgtaaaactatggagtggcggcactggcgaaaaaccactcgcagaagtg
gaaggtcatgaaccttacagagtttccaggatagcttttcatccatccggacgatttctt
ggcacttgttgttatgatgcatcttggcgattatgggatttggaacagcaggcggaagtt
cttcatcaagaaggtcatgctagagctgtacactgtattagctttcagtgcgatggtagc
gtttgtgcaacaggaggccatgattcatttggtcgaatatgggatttgcgcaccggtaga
tgcattatgttcatggatgggcatctaggatccatatttggcattgatttttcgccgaat
ggttttcacatagcaacggcgagcgaagataacagttgcaaaatatgggacttacggaag
agagcttgcatatacacgataccggcacataccagtttgctctccgatgtgaaatatcag
aaaatagaaggacaatatttggttaccgcatcgtatgacaatacggccaagatttggtcc
aataaaacatggcagcctctcaaaatgctaccaggacacgacggaaaagtaatgtccgtt
gatgtatcttccgatcacaaatatatcgcgactagttcgtacgacaggactttcaaatta
tttgctccggaataa
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integrated database retrieval system
