Pseudomyrmex gracilis (graceful twig ant): 109853353
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Entry
109853353 CDS
T05003
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109853353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109853353
03009 Ribosome biogenesis [BR:
pgc03009
]
109853353
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109853353
Spliceosome [BR:
pgc03041
]
Complex A
U1 snRNP components
U1 related factors
109853353
Complex B
109853353
Ribosome biogenesis [BR:
pgc03009
]
Eukaryotic type
Pre-60S particles
Helicases
109853353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
109853353
NCBI-ProteinID:
XP_020280957
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MAYGERERTDRRGGGGGAGSNARGGGRFGGRDGGGGGNRFGGGHKDSNFGSNNFKNRQPG
ERLRKPRWDMGSLLPFRKDFYQPHSNVTARNVHTVEAYRSNKEITVKGANIPSPNIFFEE
GGFPDYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINN
QPRLSRNDGPIALILAPTRELAQQIQQVASDFGVSSQVRNTCIFGGAPKGPQARDLERGV
EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMW
SATWPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKEGKLMKLLEEISN
EPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVAT
DVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPSNAHKASDLIQ
VLEEAKQVVNPKLYELSRNPGVYKRGRYGGRSGGGGGRGSGGRGGGPRGSRGGRDGDRGG
RFDRSSGSTNDRGKWVGSSSGGISGGSYGSSKSFPQNNFGSGTAGGNSTYSQNNSGYGGG
SYRQQNGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacggtgaacgagaacgtacagatagacgcggaggaggtggaggagctggtagt
aatgcacgcggtggtggccgatttggtggaagagatggtggcggaggaggcaacagattc
ggaggtggacacaaagacagcaatttcggaagcaacaattttaaaaaccgtcagcctggc
gaacgtctacgcaaaccgcgttgggacatgggctctcttctaccattcaggaaagatttt
tatcagccacattccaatgtaacggcacgaaatgttcacacagtggaggcttatcgttcc
aataaagagatcacggtgaagggggccaacattccgagtcctaatattttttttgaagag
ggtggctttccagactatgttctcaatgagattcggagacaaggatttggtgagccaact
gcaattcaagcgcaaggttggcccattgccttgtctggtcgagacatggttggtattgca
caaacaggttcaggaaaaacattagcatatatcttgccagcaattgtgcacataaataat
caacctagattgagtagaaatgatggtccaattgctcttatattggctccaacgagagaa
ttagcacaacaaattcaacaagtagcttctgattttggagtttcctcacaagttcgaaat
acatgcatttttggtggtgctcctaaaggacctcaagcacgtgatcttgaacgtggtgta
gaaatttgtattgccacaccaggtcgactcatagactttttggaacgtggtactacaaat
ctacgtagatgtacatatctagtactagatgaagccgatagaatgctagatatgggtttt
gagccacaaattagaaaaatagtagaacaaatacgtcctgatcgtcagactctcatgtgg
tcggcaacatggccgaaggaagtacgtaatcttgcagaagagtttttaacagattacata
caaatcaatattggttccttgcaactagctgccaatcacaatatcttacaaattgttgat
gtatgcgaagaatatgagaaagaaggtaaacttatgaagcttctagaagagatttcaaat
gaaccagaaaataaaactataatatttgtggaaactaaaagaaaagttgacgatataaca
agagctattaatagatatggatggcaagcaattggcattcacggagataaaagccaacaa
gaaagagattacgtactaaaccagttccggaatagcaggtctgctatcctagtggctacc
gatgtggcagcaagaggtttagatgtcgaggatgtcaaatttgtaataaacttggactat
ccgtccaactcagaggactatgtacaccgtatcgggcgtacgggacgctcgcaacgaaca
ggaacagcgtacgcatttttcactcctagcaatgcacacaaggctagtgatttaattcaa
gttttagaagaggctaagcaagttgtcaatccaaaattatacgagttgtctagaaatcct
ggcgtttacaaaagagggcgatatggcgggcgtagcggcggaggtggcggacgagggtcc
ggaggccgcggtggcggcccacgaggctctcgaggtggccgcgatggcgataggggtgga
agatttgaccgttcttccggtagtactaacgaccgcggcaaatgggtcggaagtagtagc
ggcggaataagcggaggtagctacggtagcagtaaatcgtttccacaaaacaactttgga
agtggaactgctggcggtaactctacttatagccagaataatagtgggtacggcggaggc
agttacagacaacaaaacggctattga
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integrated database retrieval system
