KEGG   Pseudomyrmex gracilis (graceful twig ant): 109853824
Entry
109853824         CDS       T05003                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03420  Nucleotide excision repair
pgc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109853824
   03460 Fanconi anemia pathway
    109853824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgc03032]
    109853824
   03400 DNA repair and recombination proteins [BR:pgc03400]
    109853824
DNA replication proteins [BR:pgc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    109853824
DNA repair and recombination proteins [BR:pgc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109853824
SSDB
Motif
Pfam: ERCC4 SAM_KSR1 STAT_bind PsbQ ResIII MAS20
Other DBs
NCBI-GeneID: 109853824
NCBI-ProteinID: XP_020281902
LinkDB
Position
Unknown
AA seq 875 aa
MLEYENQIFLEILQEDGLVITAKGLGIETVFANVIKAYSDPGNLVIVLGTTNYDERYFID
LLSSYGTNTLPRVVNAECSSNDREAMYLEGGVLFISGRILVVDLLKNRVPLNLVTGILVY
RAHNILNAYQEAFALRLYRQSNKTGFIKAFTNSSLAFTVGYSQVERVMKALFVKKLYLWP
RFHTIINNCLSKHKPDVIELHVKITPKMENIQTALLDIMNYVVKELKRINKYLELDELTV
ENAIAKKFHKQLHLQLDPIWHQLSTTTKQLFSDLKTLRSLIISLTYEDSVSFYAMLNRLR
TMEYAVKASGWIMMDEVENLFKYAKSRVYTDKNELKPEPNPKWLALSEVLLEIQEQKRKK
RDNKNVDKVLVLVHDNNICRQLKNYLTMGANKYLLYEALKKLSHNKEPKPSGNSGTKSTV
DQQQSTSESNTDEESPSDHDTYVLTLSQKCGESTDEETPTTSTEDIKHQTLFEECSQMAD
LDMSSHATSAPVVIIQAIKKGGDPMALLRTLTEHTPNNIILYVADIGTVRQLEVYQNINP
SLDLKVFFLIYGGSVEEQEYLTSLRREKEAFHSLINTKTTMVVPEDQDGKSEDCPALGVQ
SDNTDQENTRKGGMQLAPKVISKVIVDMREFRSELPAMLYTRGIKIEPVTLVIGDYILTP
EICVERKSISDLIGSLLSGRLYNQAVAMTRHYAKPMLLIEFDQNKPFCFQGHYYVSKDLK
NTEITGKLQLLTLHFPKLRLVWSPSPQATAQLFEELKQGRDQPDSTIAAKIGADEDSEDK
QIMVEKYNSHIQDFVAKLPGVHSKNLRILLNKGQSLDHLIKLKQEELKEILGNTNDAEML
YKALHEKCLPTDEKSSANRAVSKVRGKQLFSRIKK
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgttggaatacgaaaatcaaatatttcttgaaatccttcaagaggatggactggttatc
actgccaaaggccttggcattgaaactgttttcgcaaatgtgataaaagcttattcggat
ccgggcaatctggttatagtcctgggaactaccaattatgatgagcgttacttcatcgat
ctgcttagtagttacggaacaaacacattgccacgtgtggtcaatgctgaatgttcttct
aacgacagggaagcgatgtatttggaaggcggagtgctatttatatcgggtcgtatattg
gtggtagatctgttaaaaaatagagttccgctgaatctagtaactggtattctcgtgtac
agagctcacaatattctcaatgcatatcaagaggcgtttgctctacgtttgtacagacag
agcaacaagaccggatttatcaaggcatttacaaactcctcgttggccttcacagtcggt
tattcgcaagtggaacgagtcatgaaagctctatttgtaaaaaaattgtatttatggcca
cgctttcacacgataatcaacaattgtttatccaagcataagcccgatgttatagaactg
catgtgaagataacgccaaagatggaaaatattcaaacagccttgctcgacattatgaat
tacgttgtgaaggaattgaaaaggatcaataagtatctggaattggacgaattaaccgtg
gagaacgcaatagcgaagaaatttcacaaacagttgcatttgcaactggatccgatctgg
catcaactaagcacaacgactaaacagctgttttccgatttaaaaaccctgaggtctctc
attatatccttaacttacgaagactccgtttcattttacgcgatgttgaatcgtttgcga
actatggaatacgcggtgaaggccagcggctggataatgatggacgaagtcgagaatttg
ttcaaatacgctaaaagcagagtttacacagacaagaacgaactcaagccagaaccgaat
ccgaagtggctggccttgtcagaagtattgctcgagattcaggagcagaaacgtaagaag
agagacaataaaaatgtcgataaagttcttgtcttagtgcatgataataatatatgtcgt
cagttaaagaattatttaaccatgggcgcgaataaatacttactttacgaggctctaaag
aaattgtctcacaataaggaaccaaaaccaagtggcaatagcggaacaaagagtacggtc
gaccaacaacaatcgacatctgaaagcaacacggatgaggaaagtccaagtgatcacgac
acttatgtactcaccttgtcgcagaagtgtggtgaaagcaccgatgaggagactccgact
acttctacggaagatataaaacatcaaactttgttcgaagaatgttctcaaatggcagat
ttggatatgagcagtcacgcaacatccgcacccgtagtcatcatacaagctataaaaaag
ggaggagatccaatggcgttgctacgaacgttgaccgaacatacgccgaataatattatt
ctgtacgtagccgatatcgggaccgtgagacagctggaagtgtatcagaatatcaatccg
tccttagatctgaaagtattctttttaatttacggaggatccgtcgaggaacaagaatat
ctcacttccttgcgacgggagaaagaagcatttcattctttgattaacacgaagactacc
atggttgtgccagaagatcaagatggaaagtccgaggattgtccagctctcggggttcag
tcagataacacggatcaagagaacacgcgcaaaggtggaatgcaattggcacctaaagta
atttcgaaagttattgttgatatgagagaatttagaagcgagttgcccgccatgttgtac
acgcgcggcataaagatcgaaccggtgacgttagtgatcggtgattatattttaacgccg
gaaatatgcgttgagagaaaaagcatatccgatttgatcggttctttgctttctggaaga
ttatacaatcaggcagttgctatgacgagacactacgccaagccgatgctcctcatagaa
tttgatcagaacaaaccgttttgttttcagggacattactacgtcagcaaagatctcaag
aatacagaaataacaggaaagctgcagttgttgacacttcattttcctaaactgagactc
gtatggtctcctagtccacaggcgacagcacagttatttgaagaattaaagcaaggacga
gatcaacccgattcaactatagctgctaaaattggagcggatgaagattcggaagacaag
cagataatggtagaaaaatataattctcacattcaggattttgtggccaaattgccaggt
gtacattcaaagaatttgcgtattttattgaacaaaggacaatcattggaccatcttatc
aaacttaaacaagaagaactaaaagaaattcttgggaatacaaatgatgctgaaatgttg
tacaaagctctgcatgaaaaatgtttgccaacggatgaaaagtcgtcagcgaacagagct
gtttctaaagtacgtggtaagcaacttttttctaggataaaaaagtga

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